RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 THAP4Q8WY91 577 aa2.18□□□□□ -2.06
LRCH3-209ENST00000452660 ABTB1Q969K4 478 aaPredicted RBP2.18□□□□□ -2.06
LRCH3-209ENST00000452660 RNFT2Q96EX2 444 aa2.18□□□□□ -2.06
LRCH3-209ENST00000452660 UBXN6Q9BZV1 441 aa2.18□□□□□ -2.06
LRCH3-209ENST00000452660 WDR12Q9GZL7 423 aaKnown RBP2.18□□□□□ -2.06
LRCH3-209ENST00000452660 LRRC4Q9HBW1 653 aa2.18□□□□□ -2.06
LRCH3-209ENST00000452660 SAYSD1Q9NPB0 183 aa2.18□□□□□ -2.06
LRCH3-209ENST00000452660 RASSF1Q9NS23 344 aa2.18□□□□□ -2.06
LRCH3-209ENST00000452660 BEX4Q9NWD9 120 aaPredicted RBP2.18□□□□□ -2.06
LRCH3-209ENST00000452660 DACT1Q9NYF0 836 aa2.18□□□□□ -2.06
LRCH3-209ENST00000452660 KLHL42Q9P2K6 505 aa2.18□□□□□ -2.06
LRCH3-209ENST00000452660 CARD8Q9Y2G2 431 aa2.18□□□□□ -2.06
LRCH3-209ENST00000452660 SMCHD1A6NHR9 2005 aa2.18□□□□□ -2.06
LRCH3-209ENST00000452660 PDS5AQ29RF7 1337 aaKnown RBP2.17□□□□□ -2.06
LRCH3-209ENST00000452660 HSPB2A8KAH6 182 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 KRTAP16-1A8MUX0 517 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 KLRF2D3W0D1 207 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 PSMD14O00487 310 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 KLK8O60259 260 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 WDR1O75083 606 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 ATP2C2O75185 946 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 MYL1P05976 194 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 MMP2P08253 660 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 KRT9P35527 623 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 DCTP40126 519 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 FASLGP48023 281 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 GNB1P62873 340 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 HSPB2Q16082 182 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 CTF1Q16619 201 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 EDRF1Q3B7T1 1238 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 KRTAP13-3Q3SY46 172 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 CTXN3Q4LDR2 81 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 ZNF484Q5JVG2 852 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 SPINK14Q6IE38 97 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 WDR73Q6P4I2 378 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 METTL7BQ6UX53 244 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 SYNE3Q6ZMZ3 975 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 NOTCH2NLQ7Z3S9 236 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 CACNA2D3Q8IZS8 1091 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 USP38Q8NB14 1042 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 WDR20Q8TBZ3 569 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 RAB40AQ8WXH6 277 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 ALG14Q96F25 216 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 LRR1Q96L50 414 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 ELAC2Q9BQ52 826 aaKnown RBP2.17□□□□□ -2.06
LRCH3-209ENST00000452660 CTDSP1Q9GZU7 261 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 CNGB3Q9NQW8 809 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 ZNF624Q9P2J8 865 aaPredicted RBP2.17□□□□□ -2.06
LRCH3-209ENST00000452660 CDC23Q9UJX2 597 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 RALYQ9UKM9 306 aaKnown RBP2.17□□□□□ -2.06
LRCH3-209ENST00000452660 DLGAP4Q9Y2H0 992 aa2.17□□□□□ -2.06
LRCH3-209ENST00000452660 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.17□□□□□ -2.06
LRCH3-209ENST00000452660 CTAGE9A4FU28 777 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 NR5A2O00482 541 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 DVL1O14640 695 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 TCERG1O14776 1098 aaKnown RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 ARHGEF9O43307 516 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 PRKNO60260 465 aaPredicted RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 IGHV4-39P01824 125 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 CSTBP04080 98 aaKnown RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 TK1P04183 234 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 KRT18P05783 430 aaKnown RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 CTAGE8P0CG41 777 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 NR1D1P20393 614 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 GNL1P36915 607 aaPredicted RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 DVL1P1P54792 670 aaPredicted RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 IRX1P78414 480 aaPredicted RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 PAPPA-AS1Q5QFB9 102 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 SFMBT2Q5VUG0 894 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 SULT6B1Q6IMI4 303 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 CCSAPQ6IQ19 270 aaPredicted RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 C17orf99Q6UX52 265 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 KSR2Q6VAB6 950 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 RRAGAQ7L523 313 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 LINGO2Q7L985 606 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 TMTC1Q8IUR5 882 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 CTAGE4Q8IX94 777 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 BEST2Q8NFU1 509 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 SLC20A1Q8WUM9 679 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 FBXL8Q96CD0 374 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 CCDC136Q96JN2 1154 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 LINC00479Q96M42 142 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 ZNF583Q96ND8 569 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 OPRPNQ99935 248 aaPredicted RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 SYT17Q9BSW7 474 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 HAUS8Q9BT25 410 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 CSTL1Q9H114 145 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 WDR13Q9H1Z4 485 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 PLEKHA4Q9H4M7 779 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 TAF1DQ9H5J8 278 aaPredicted RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 ARNT2Q9HBZ2 717 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 CISD1Q9NZ45 108 aaKnown RBP2.16□□□□□ -2.06
LRCH3-209ENST00000452660 CHPF2Q9P2E5 772 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 PADI1Q9ULC6 663 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 KCNS2Q9ULS6 477 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 GDAQ9Y2T3 454 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 DERAQ9Y315 318 aa2.16□□□□□ -2.06
LRCH3-209ENST00000452660 BICRAQ9NZM4 1560 aa2.15□□□□□ -2.06
LRCH3-209ENST00000452660 IGLV5-45A0A087WSX0 123 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms