RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-223	ENST00000452489	ARPC2	O15144	300 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	PTTG1	O95997	202 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	MT-CO1	P00395	513 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	GFAP	P14136	432 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	CTRB1	P17538	263 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	PGAM1	P18669	254 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	PCMT1	P22061	227 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	HTR2B	P41595	481 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	OR3A3	P47888	321 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	TFAM	Q00059	246 aa	Known RBP	18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	DUSP7	Q16829	419 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	GRTP1	Q5TC63	336 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	CTRB2	Q6GPI1	263 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	NLGN4X	Q8N0W4	816 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	METTL4	Q8N3J2	472 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	SPPL2B	Q8TCT7	592 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	TRIM63	Q969Q1	353 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	BIRC7	Q96CA5	298 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	TRIM15	Q9C019	465 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	MKRN2	Q9H000	416 aa	Known RBP	18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	INTS10	Q9NVR2	710 aa	Known RBP	18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	PDE10A	Q9Y233	779 aa		18.71	■□□□□ 0.59
PTPA-223	ENST00000452489	APOL1	O14791	398 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	CAPN1	P07384	714 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	SAT1	P21673	171 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	HSPA14	Q0VDF9	509 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	CAPRIN1	Q14444	709 aa	Known RBP	18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	SQLE	Q14534	574 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	NFIX	Q14938	502 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	CDO1	Q16878	200 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	ZNF181	Q2M3W8	571 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	CTU2	Q2VPK5	515 aa	Known RBP	18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	XKR9	Q5GH70	373 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	PXDC1	Q5TGL8	231 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	SMIM5	Q71RC9	77 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	PEX13	Q92968	403 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	ISL2	Q96A47	359 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	CERS2	Q96G23	380 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	SCYL1	Q96KG9	808 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	CPXM1	Q96SM3	734 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	CPNE1	Q99829	537 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	HPS4	Q9NQG7	708 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	GTSE1	Q9NYZ3	720 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	TTC24	A2A3L6	582 aa	Predicted RBP	18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	SNTN	A6NMZ2	147 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	ZNF99	A8MXY4	864 aa	Predicted RBP	18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	HAT1	O14929	419 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	UBD	O15205	165 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	SNX2	O60749	519 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	CHRNA1	P02708	482 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	NCK1	P16333	377 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	LIMK2	P53671	638 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	ITPK1	Q13572	414 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	SEMA5A	Q13591	1074 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	NXNL2	Q5VZ03	156 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	LCN8	Q6JVE9	175 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	FAM109A	Q8N4B1	249 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	CHDH	Q8NE62	594 aa	Predicted RBP	18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	PCDH19	Q8TAB3	1148 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	PROX1	Q92786	737 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	HSFY1	Q96LI6	401 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	C2orf49	Q9BVC5	232 aa	Predicted RBP	18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	ATP13A2	Q9NQ11	1180 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	RPRD1B	Q9NQG5	326 aa	Known RBP	18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	C8orf4	Q9NR00	106 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	SNX5	Q9Y5X3	404 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	SBF2	Q86WG5	1849 aa		18.7	■□□□□ 0.58
PTPA-223	ENST00000452489	C16orf96	A6NNT2	1141 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	TCF3	P15923	654 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	PKLR	P30613	574 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	HTR3A	P46098	478 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	C6orf141	Q5SZD1	244 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	SVOP	Q8N4V2	548 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	TOR1AIP2	Q8NFQ8	470 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	NXNL1	Q96CM4	212 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	OMA1	Q96E52	524 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	FCRL3	Q96P31	734 aa	Predicted RBP	18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	SLC25A23	Q9BV35	468 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	ZNF518B	Q9C0D4	1074 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	DNMT3L	Q9UJW3	386 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	ARID2	Q68CP9	1835 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489		A0A1W2PQ72	361 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	EXTL3	O43909	919 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	NDUFB10	O96000	172 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	OR2B6	P58173	313 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	C1QTNF8	P60827	252 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	FCHO2	Q0JRZ9	810 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	FAM205BP	Q63HN1	556 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	IDO2	Q6ZQW0	420 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	XYLT1	Q86Y38	959 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	SIAH1	Q8IUQ4	282 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	C8orf59	Q8N0T1	100 aa	Predicted RBP	18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	HDAC2	Q92769	488 aa	Known RBP	18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	PMEPA1	Q969W9	287 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	ST6GAL2	Q96JF0	529 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	SEPHS2	Q99611	448 aa		18.69	■□□□□ 0.58
PTPA-223	ENST00000452489	SLC30A3	Q99726	388 aa		18.69	■□□□□ 0.58

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