RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 ATXN7L3BQ96GX2 97 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 SGSM3Q96HU1 749 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 PPP1R16AQ96I34 528 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 CABS1Q96KC9 395 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 TBATAQ96M53 351 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 AGAP2Q99490 1192 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 RBBP8Q99708 897 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 P2RY13Q9BPV8 354 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 RPP25Q9BUL9 199 aaKnown RBP9.71□□□□□ -0.86
RFC4-210ENST00000449502 RHOJQ9H4E5 214 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 SSU72Q9NP77 194 aaKnown RBP9.71□□□□□ -0.86
RFC4-210ENST00000449502 CATSPERZQ9NTU4 200 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 EURLQ9NYK6 297 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 SLC17A6Q9P2U8 582 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 TLK1Q9UKI8 766 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 FBXO5Q9UKT4 447 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 VPS9D1Q9Y2B5 631 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 FNDC3AQ9Y2H6 1198 aaKnown RBP9.71□□□□□ -0.86
RFC4-210ENST00000449502 KCTD3Q9Y597 815 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 SPO11Q9Y5K1 396 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 SLC30A1Q9Y6M5 507 aa9.71□□□□□ -0.86
RFC4-210ENST00000449502 ZNF638Q14966 1978 aaKnown RBP9.71□□□□□ -0.86
RFC4-210ENST00000449502 A0A0J9YYE9 177 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 CCDC162PA2VCL2 907 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 GRXCR2A6NFK2 248 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 CAPN8A6NHC0 703 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 C2CD4DB7Z1M9 353 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 GOLGA8RI6L899 631 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 KPNA3O00505 521 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 SOX1O00570 391 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 NPC1O15118 1278 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 CD3EAPO15446 510 aaKnown RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 PRPF4O43172 522 aaKnown RBP eCLIP9.7□□□□□ -0.86
RFC4-210ENST00000449502 MBTPS2O43462 519 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 RNASEH1O60930 286 aaKnown RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 NDUFS3O75489 264 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 LEFTY1O75610 366 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 TRBC1P01850 177 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 C1QAP02745 245 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 MPOP05164 745 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 ALPIP09923 528 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 CHN1P15882 459 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 MC4RP32245 332 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 HNF1BP35680 557 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 TNFRSF4P43489 277 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 CLCN5P51795 746 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 ZNF140P52738 457 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 MPP1Q00013 466 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 IL9RQ01113 521 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 PFKPQ01813 784 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 GRSF1Q12849 480 aaKnown RBP eCLIP9.7□□□□□ -0.86
RFC4-210ENST00000449502 CTBP1Q13363 440 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 MSLNQ13421 630 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 ZNF234Q14588 700 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 USP10Q14694 798 aaKnown RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 PTPRNQ16849 979 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 AAK1Q2M2I8 961 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 GAB4Q2WGN9 574 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 HNRNPA1L2Q32P51 320 aaKnown RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 TAF1BQ53T94 588 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 ZNF805Q5CZA5 627 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 ZRANB3Q5FWF4 1079 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 RNF187Q5TA31 235 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 ZDHHC20Q5W0Z9 365 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 TPRG1Q6ZUI0 275 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 TAS2R42Q7RTR8 314 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 LYSMD3Q7Z3D4 306 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 CNTN4Q8IWV2 1026 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 C2CD4AQ8NCU7 369 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 MDGA1Q8NFP4 955 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 OR13J1Q8NGT2 312 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 MDM1Q8TC05 714 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 HCAR2Q8TDS4 363 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 FRS2Q8WU20 508 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 SCG3Q8WXD2 468 aaKnown RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 PBXIP1Q96AQ6 731 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 TSPAN17Q96FV3 270 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 CDKN2AIPNLQ96HQ2 116 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 LRCH3Q96II8 777 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 VPS39Q96JC1 886 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 ELMO2Q96JJ3 720 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 NSMCE3Q96MG7 304 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 KLF6Q99612 283 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 PHF7Q9BWX1 381 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 SLC13A1Q9BZW2 595 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 VPS11Q9H270 941 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 CCDC68Q9H2F9 335 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 C8orf33Q9H7E9 229 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 BPIFA1Q9NP55 256 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 RAD18Q9NS91 495 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 PCMTD2Q9NV79 361 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 POLR3BQ9NW08 1133 aaPredicted RBP9.7□□□□□ -0.86
RFC4-210ENST00000449502 LIMD1Q9UGP4 676 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 APPL1Q9UKG1 709 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 SLC39A10Q9ULF5 831 aa9.7□□□□□ -0.86
RFC4-210ENST00000449502 GOLGA8CPA6NN73 597 aa9.69□□□□□ -0.86
RFC4-210ENST00000449502 A8MX80 341 aa9.69□□□□□ -0.86
RFC4-210ENST00000449502 FOXO6A8MYZ6 492 aa9.69□□□□□ -0.86
RFC4-210ENST00000449502 UPK3BL1B0FP48 263 aa9.69□□□□□ -0.86
RFC4-210ENST00000449502 UPK3BL2E5RIL1 263 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms