RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.49□□□□□ -1.53
LMO3-209ENST00000447609 PCDHB5Q9Y5E4 795 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 CPQQ9Y646 472 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 PLXNA1Q9UIW2 1896 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 ILVBLA1L0T0 632 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 ISPDA4D126 451 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 SAGE2PA6NJ88 616 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 M0QYV0 167 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 RFXAPO00287 272 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 ZBTB24O43167 697 aaPredicted RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 LYPLA1O75608 230 aaPredicted RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 GALTP07902 379 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 TGM2P21980 687 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 IL12AP29459 219 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 HOXA11P31270 313 aaPredicted RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 SPRP35270 261 aaPredicted RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 RAP1GAPP47736 663 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 CDH8P55286 799 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 TPD52P55327 224 aaPredicted RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 PKNOX1P55347 436 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 BNIP3Q12983 259 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 TOP3AQ13472 1001 aaPredicted RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 MBTPS1Q14703 1052 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 RAB39AQ14964 217 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 NOMO1Q15155 1222 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 DGUOKQ16854 277 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 TRIM71Q2Q1W2 868 aaKnown RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 ANKDD1AQ495B1 522 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 SPATS1Q496A3 300 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 SLC39A12Q504Y0 691 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 TIGD5Q53EQ6 642 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 ARHGAP15Q53QZ3 475 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 SLX4IPQ5VYV7 408 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 LRRC8EQ6NSJ5 796 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 TMEM214Q6NUQ4 689 aaKnown RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 CASC4Q6P4E1 433 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 ISLR2Q6UXK2 745 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 DNAJC14Q6Y2X3 702 aaPredicted RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 ANKRD13BQ86YJ7 626 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 TAB3Q8N5C8 712 aaPredicted RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 SLC15A4Q8N697 577 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 HSPH1Q92598 858 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 TFAP2CQ92754 450 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 UHRF1Q96T88 793 aaPredicted RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 TMEM175Q9BSA9 504 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 MFRPQ9BY79 579 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 ING2Q9H160 280 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 MUC13Q9H3R2 512 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 POPDC2Q9HBU9 364 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 SPAG4Q9NPE6 437 aa5.49□□□□□ -1.53
LMO3-209ENST00000447609 MRPL42Q9Y6G3 142 aaKnown RBP5.49□□□□□ -1.53
LMO3-209ENST00000447609 ZSWIM8A7E2V4 1837 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 MYOCOSA0A1B0GUC4 107 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.48□□□□□ -1.53
LMO3-209ENST00000447609 DAB1O75553 588 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 RNASEH2AO75792 299 aaKnown RBP5.48□□□□□ -1.53
LMO3-209ENST00000447609 ATE1O95260 518 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 APRTP07741 180 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 INHBBP09529 407 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 MLNP12872 115 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 GLDCP23378 1020 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 ITGB8P26012 769 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 EPHA3P29320 983 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 MAGEA6P43360 314 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 NRIP1P48552 1158 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 TRPC1P48995 793 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 TUFMP49411 452 aaKnown RBP5.48□□□□□ -1.53
LMO3-209ENST00000447609 NUMBP49757 651 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 RPL14P50914 215 aaKnown RBP5.48□□□□□ -1.53
LMO3-209ENST00000447609 MGAT3Q09327 533 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 MERTKQ12866 999 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 BNIP2Q12982 314 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 PDK2Q15119 407 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 CYP2A13Q16696 494 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 LSM12Q3MHD2 195 aaKnown RBP5.48□□□□□ -1.53
LMO3-209ENST00000447609 ATAT1Q5SQI0 421 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 GRTP1Q5TC63 336 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 ZNF773Q6PK81 442 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 PRSS55Q6UWB4 352 aaPredicted RBP5.48□□□□□ -1.53
LMO3-209ENST00000447609 KCTD8Q6ZWB6 473 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 C10orf107Q8IVU9 208 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 UNC45BQ8IWX7 931 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 PHTF2Q8N3S3 785 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 COLGALT1Q8NBJ5 622 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 LILRB4Q8NHJ6 448 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 CYGBQ8WWM9 190 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 MRPS31Q92665 395 aaKnown RBP5.48□□□□□ -1.53
LMO3-209ENST00000447609 B3GALT6Q96L58 329 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 CNPY3Q9BT09 278 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 ARMC7Q9H6L4 198 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 MAN1C1Q9NR34 630 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 WARS2Q9UGM6 360 aaKnown RBP5.48□□□□□ -1.53
LMO3-209ENST00000447609 PRELID1Q9Y255 219 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 KIAA1217Q5T5P2 1943 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 AQP12BA6NM10 295 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 M0R3G1 203 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 KCNN4O15554 427 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 ZMPSTE24O75844 475 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 MYO1DO94832 1006 aa5.48□□□□□ -1.53
LMO3-209ENST00000447609 APOA1P02647 267 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms