RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TOP3AQ13472 1001 aaPredicted RBP16.68■□□□□ 0.26
TCOF1-206ENST00000445265 HNRNPDQ14103 355 aaKnown RBP16.68■□□□□ 0.26
TCOF1-206ENST00000445265 MAPKAPK3Q16644 382 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 TSTD2Q5T7W7 516 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 CLEC20AQ6ZU45 233 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.68■□□□□ 0.26
TCOF1-206ENST00000445265 ATP11BQ9Y2G3 1177 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 KAT6AQ92794 2004 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 EME2A4GXA9 379 aaPredicted RBP16.68■□□□□ 0.26
TCOF1-206ENST00000445265 RPP40O75818 363 aaKnown RBP16.68■□□□□ 0.26
TCOF1-206ENST00000445265 CES1P23141 567 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 CD52P31358 61 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 GPR158Q5T848 1215 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 TBC1D30Q9Y2I9 924 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 SOAT1P35610 550 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 PSMD7P51665 324 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 IRF9Q00978 393 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 REP15Q6BDI9 236 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 FBXO30Q8TB52 745 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 POP5Q969H6 163 aaKnown RBP16.68■□□□□ 0.26
TCOF1-206ENST00000445265 ROPN1LQ96C74 230 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 KLQ9UEF7 1012 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 CYTH4Q9UIA0 394 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 MYH4Q9Y623 1939 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 PPEF2O14830 753 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 PSMB9P28065 219 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 YBEYP58557 167 aaPredicted RBP16.67■□□□□ 0.26
TCOF1-206ENST00000445265 PCLAFQ15004 111 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 CCDC92Q53HC0 331 aaPredicted RBP16.67■□□□□ 0.26
TCOF1-206ENST00000445265 PROSER1Q86XN7 944 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 GANCQ8TET4 914 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 DNMT3LQ9UJW3 386 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 SLC7A4O43246 635 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 ATP6V1E1P36543 226 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 CLCNKBP51801 687 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 SLC5A3P53794 718 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 RPL26P61254 145 aaKnown RBP16.67■□□□□ 0.26
TCOF1-206ENST00000445265 BCL2L1Q07817 233 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 PARP15Q460N3 678 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 CYS1Q717R9 158 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 TREML1Q86YW5 311 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 TBCDQ9BTW9 1192 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 HAPLN2Q9GZV7 340 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 TIMMDC1Q9NPL8 285 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 C3orf18Q9UK00 162 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 PTGES3LE9PB15 166 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 OTCP00480 354 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 CYP2A7P20853 494 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 TIGD2Q4W5G0 525 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 CDHR3Q6ZTQ4 885 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 FRMD7Q6ZUT3 714 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 CPSF7Q8N684 471 aaKnown RBP16.67■□□□□ 0.26
TCOF1-206ENST00000445265 TUBGCP5Q96RT8 1024 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 GDAP2Q9NXN4 497 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 USE1Q9NZ43 259 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 CNTN3Q9P232 1028 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 MOSPD1Q9UJG1 213 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 SF3B1O75533 1304 aaKnown RBP eCLIP16.67■□□□□ 0.266e-6■■■■■ 114.9
TCOF1-206ENST00000445265 MYH14Q7Z406 1995 aaKnown RBP16.67■□□□□ 0.26
TCOF1-206ENST00000445265 IGKV6D-21A0A0A0MT36 114 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 A0A1W2PQH9 124 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 IFNA14P01570 189 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 IL1BP01584 269 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 GALNT3Q14435 633 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 SCIMPQ6UWF3 145 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 RTL3Q8N8U3 475 aaKnown RBP16.67■□□□□ 0.26
TCOF1-206ENST00000445265 MAGEL2Q9UJ55 1249 aa16.67■□□□□ 0.26
TCOF1-206ENST00000445265 KPNA4O00629 521 aaPredicted RBP16.66■□□□□ 0.26
TCOF1-206ENST00000445265 FSTL1Q12841 308 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 KRR1Q13601 381 aaKnown RBP16.66■□□□□ 0.26
TCOF1-206ENST00000445265 DDR2Q16832 855 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 NOMO2Q5JPE7 1267 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 FAM182AQ5T1J6 154 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 EPGNQ6UW88 154 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 DDX53Q86TM3 631 aaKnown RBP16.66■□□□□ 0.26
TCOF1-206ENST00000445265 KIAA2013Q8IYS2 634 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 TWIST2Q8WVJ9 160 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 OR52B2Q96RD2 323 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 SPATA16Q9BXB7 569 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 MRPL9Q9BYD2 267 aaKnown RBP16.66■□□□□ 0.26
TCOF1-206ENST00000445265 PTTG2Q9NZH5 202 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 SNX10Q9Y5X0 201 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 DOCK2Q92608 1830 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 FZD9O00144 591 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 ULK1O75385 1050 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 DNAJB1P25685 340 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 EPHB3P54753 998 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 ZCCHC7Q8N3Z6 543 aaKnown RBP16.66■□□□□ 0.26
TCOF1-206ENST00000445265 MCOLN3Q8TDD5 553 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 ARAP2Q8WZ64 1704 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 LRG1P02750 347 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 BBS7Q8IWZ6 715 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 STARD7Q9NQZ5 370 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 SMPD4Q9NXE4 827 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 FADS3Q9Y5Q0 445 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 TAF1P21675 1872 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 GNG14A0A1W2PPG7 69 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 ANXA6P08133 673 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 OR56A5P0C7T3 313 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 SLC1A2P43004 574 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms