RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 HEXIM1O94992 359 aaKnown RBP13.77□□□□□ -0.21
LTBR-202ENST00000440421 ALPPL2P10696 532 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 CKMT2P17540 419 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 LHCGRP22888 699 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 CES1P23141 567 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 NFKBIAP25963 317 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 PEX5P50542 639 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 EPHB1P54762 984 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 CLDN6P56747 220 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 DAB2P98082 770 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 PPARDQ03181 441 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 MTM1Q13496 603 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 ARHGEF7Q14155 803 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 NFATC4Q14934 902 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 PDK1Q15118 436 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 PRRT3Q5FWE3 981 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 ALG1LQ6GMV1 187 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 USP45Q70EL2 814 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 RD3Q7Z3Z2 195 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 HSD11B1LQ7Z5J1 315 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 KIAA1328Q86T90 577 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 TSPAN33Q86UF1 283 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 HID1Q8IV36 788 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 CNTD1Q8N815 330 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 BTN2A2Q8WVV5 523 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 PIH1D2Q8WWB5 315 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 KRT35Q92764 455 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 GATA6Q92908 595 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 TSACCQ96A04 125 aaPredicted RBP13.77□□□□□ -0.21
LTBR-202ENST00000440421 NUS1Q96E22 293 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 SCRN2Q96FV2 425 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 COQ10AQ96MF6 247 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 OLFM3Q96PB7 478 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 IL12RB2Q99665 862 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 TMEM121BQ9BXQ6 578 aaPredicted RBP13.77□□□□□ -0.21
LTBR-202ENST00000440421 NLGN3Q9NZ94 848 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 SPASTQ9UBP0 616 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 AMACRQ9UHK6 382 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 CHKBQ9Y259 395 aa13.77□□□□□ -0.21
LTBR-202ENST00000440421 PTPRBP23467 1997 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 PPP1R12AO14974 1030 aaPredicted RBP13.76□□□□□ -0.21
LTBR-202ENST00000440421 FZD6O60353 706 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 GCATO75600 419 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 ZRANB2O95218 330 aaKnown RBP eCLIP13.76□□□□□ -0.215e-8■■■■■ 51.3
LTBR-202ENST00000440421 PECAM1P16284 738 aaPredicted RBP13.76□□□□□ -0.21
LTBR-202ENST00000440421 HTR1BP28222 390 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 CDC25BP30305 580 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 HNF1BP35680 557 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 ETV3P41162 512 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 CD86P42081 329 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 VAV2P52735 878 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 IFI35P80217 286 aaPredicted RBP13.76□□□□□ -0.21
LTBR-202ENST00000440421 ADCY2Q08462 1091 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 TFDP2Q14188 446 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 TAZQ16635 292 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 ALG11Q2TAA5 492 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 DEFB133Q30KQ1 61 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 TFDP3Q5H9I0 405 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 ENPP7Q6UWV6 458 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 TMPRSS7Q7RTY8 843 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 TMEM139Q8IV31 216 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 KATNAL2Q8IYT4 538 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 RCOR2Q8IZ40 523 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 NDUFAF2Q8N183 169 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 PELI3Q8N2H9 469 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 LPCAT1Q8NF37 534 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 HAUS1Q96CS2 278 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 APOLD1Q96LR9 279 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 AGAP3Q96P47 875 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 MCCC1Q96RQ3 725 aaPredicted RBP13.76□□□□□ -0.21
LTBR-202ENST00000440421 LRRC61Q9BV99 259 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 TDRD1Q9BXT4 1180 aaKnown RBP13.76□□□□□ -0.21
LTBR-202ENST00000440421 SLC13A1Q9BZW2 595 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 LACRTQ9GZZ8 138 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 IMPACTQ9P2X3 320 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.76□□□□□ -0.21
LTBR-202ENST00000440421 PCDHGA1Q9Y5H4 931 aa13.76□□□□□ -0.21
LTBR-202ENST00000440421 ARID1BQ8NFD5 2236 aaPredicted RBP13.75□□□□□ -0.21
LTBR-202ENST00000440421 hCG_1818297A0A087WSY0 165 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 A0A0J9YYE9 177 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 FAM221BA6H8Z2 402 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 GOLGA6CA6NDK9 693 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 GOLGA6BA6NDN3 693 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 CACNB4O00305 520 aaPredicted RBP13.75□□□□□ -0.21
LTBR-202ENST00000440421 TRBC1P01850 177 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 CELA2BP08218 269 aaPredicted RBP13.75□□□□□ -0.21
LTBR-202ENST00000440421 MMP2P08253 660 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 GOLGA6DP0CG33 693 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 CA4P22748 312 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 SRP54P61011 504 aaKnown RBP13.75□□□□□ -0.21
LTBR-202ENST00000440421 SKOR1P84550 965 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 ST3GAL2Q16842 350 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 LRRC66Q68CR7 880 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 KCTD16Q68DU8 428 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 PNCKQ6P2M8 343 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 CRTC1Q6UUV9 634 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 CCNI2Q6ZMN8 369 aaPredicted RBP13.75□□□□□ -0.21
LTBR-202ENST00000440421 RFLNAQ6ZTI6 216 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 Q6ZVL8 140 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 GALNT15Q8N3T1 639 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms