RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 NEDD8Q15843 81 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 HKDC1Q2TB90 917 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 CRTC3Q6UUV7 619 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 LRRC17Q8N6Y2 441 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 NAT16Q8N8M0 369 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 AVL9Q8NBF6 648 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 OR6Y1Q8NGX8 325 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SLC22A17Q8WUG5 538 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 KIAA1143Q96AT1 154 aaPredicted RBP11.22□□□□□ -0.61
SCN4A-201ENST00000435607 LMLNQ96KR4 655 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 CEP41Q9BYV8 373 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PHF24Q9UPV7 400 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 KCNK1O00180 336 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SNAP91O60641 907 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 TNFRSF21O75509 655 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SCGB2A1O75556 95 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SLC35G6P0C7Q6 338 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 HGFP14210 728 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 CCNB1P14635 433 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 GNALP38405 381 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 OC90Q02509 493 aaPredicted RBP11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PDSS1Q5T2R2 415 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 POMZP3Q6PJE2 187 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 KBTBD8Q8NFY9 601 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.61
SCN4A-201ENST00000435607 HSFY1Q96LI6 401 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 ANKZF1Q9H8Y5 726 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 B3GAT2Q9NPZ5 323 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SERINC1Q9NRX5 453 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 DMTF1Q9Y222 760 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PTPRJQ12913 1337 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 EIF4BP23588 611 aaKnown RBP11.22□□□□□ -0.61
SCN4A-201ENST00000435607 GDI2P50395 445 aaKnown RBP11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PLK1P53350 603 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 AAK1Q2M2I8 961 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 ZNF697Q5TEC3 545 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 THAP5Q7Z6K1 395 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 ADGRG6Q86SQ4 1221 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 MAB21L3Q8N8X9 362 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SLAIN1Q8ND83 568 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 ACTRT1Q8TDG2 376 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 CDC14AQ9UNH5 594 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PRKAB1Q9Y478 270 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 GMPPBQ9Y5P6 360 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 A0A087WXM4 84 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 FAM234BA2RU67 622 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 ADM5C9JUS6 153 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PPP2R2DQ66LE6 453 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 ZNF730Q6ZMV8 503 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 GPRIN3Q6ZVF9 776 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 APOPT1Q96IL0 206 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PANX1Q96RD7 426 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 AGO1Q9UL18 857 aaKnown RBP11.22□□□□□ -0.61
SCN4A-201ENST00000435607 IFT52Q9Y366 437 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 CRYBB1P53674 252 aaPredicted RBP11.21□□□□□ -0.61
SCN4A-201ENST00000435607 TUBB3Q13509 450 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 METTL21CQ5VZV1 264 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 MTDHQ86UE4 582 aaKnown RBP11.21□□□□□ -0.61
SCN4A-201ENST00000435607 RASGRP3Q8IV61 690 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 OR2AJ1Q8NGZ0 328 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 EPS8L3Q8TE67 593 aaKnown RBP11.21□□□□□ -0.61
SCN4A-201ENST00000435607 RGS17Q9UGC6 210 aaPredicted RBP11.21□□□□□ -0.61
SCN4A-201ENST00000435607 ADAM28Q9UKQ2 775 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 TRIM64BA6NI03 449 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 AKAP8O43823 692 aaKnown RBP11.21□□□□□ -0.61
SCN4A-201ENST00000435607 EPHX1P07099 455 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 SMIM10L2AP0DMW4 78 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 SMIM10L2BP0DMW5 78 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 ZNF823P16415 610 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 PTPN4P29074 926 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 ATP6V0D1P61421 351 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 QPRTQ15274 297 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 WSCD1Q658N2 575 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 GPR180Q86V85 440 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 FAM13CQ8NE31 585 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 FBXO30Q8TB52 745 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 ACOT12Q8WYK0 555 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 ALG9Q9H6U8 611 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 PLGRKTQ9HBL7 147 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 H3BQF6 201 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 OR7A10O76100 309 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 DBIP07108 87 aaKnown RBP11.21□□□□□ -0.61
SCN4A-201ENST00000435607 PAPD7Q5XG87 772 aaKnown RBP11.21□□□□□ -0.61
SCN4A-201ENST00000435607 DEF8Q6ZN54 512 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 UNC5BQ8IZJ1 945 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 MCOLN2Q8IZK6 566 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 CDC42EP4Q9H3Q1 356 aaKnown RBP11.21□□□□□ -0.61
SCN4A-201ENST00000435607 EPB41L4AQ9HCS5 686 aaPredicted RBP11.21□□□□□ -0.61
SCN4A-201ENST00000435607 ZNF222Q9UK12 451 aa11.21□□□□□ -0.61
SCN4A-201ENST00000435607 TULP4Q9NRJ4 1543 aa11.21□□□□□ -0.62
SCN4A-201ENST00000435607 PPP1R3GB7ZBB8 358 aa11.21□□□□□ -0.62
SCN4A-201ENST00000435607 ELK3P41970 407 aa11.21□□□□□ -0.62
SCN4A-201ENST00000435607 FMR1Q06787 632 aaKnown RBP eCLIP11.21□□□□□ -0.62
SCN4A-201ENST00000435607 KCNMA1Q12791 1236 aa11.21□□□□□ -0.62
SCN4A-201ENST00000435607 SLC9B1Q4ZJI4 515 aa11.21□□□□□ -0.62
SCN4A-201ENST00000435607 CELF3Q5SZQ8 465 aaKnown RBP11.21□□□□□ -0.62
SCN4A-201ENST00000435607 GCNT7Q6ZNI0 430 aa11.21□□□□□ -0.62
SCN4A-201ENST00000435607 QSOX2Q6ZRP7 698 aa11.21□□□□□ -0.62
SCN4A-201ENST00000435607 PCBD2Q9H0N5 130 aa11.21□□□□□ -0.62
SCN4A-201ENST00000435607 TMEM134Q9H6X4 195 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms