RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PDZK1P1A8MUH7 402 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 KMOO15229 486 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 XPNPEP2O43895 674 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 NOBOXO60393 691 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ASS1P00966 412 aaKnown RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 POLR2EP19388 210 aaKnown RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 MAGEA3P43357 314 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 STX1BP61266 288 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 PPIL2Q13356 520 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 RABL3Q5HYI8 236 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 TMEM179Q6ZVK1 233 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 SLC41A1Q8IVJ1 513 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ZBTB8OSQ8IWT0 167 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ZUFSPQ96AP4 578 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 BIRC7Q96CA5 298 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 NXNL1Q96CM4 212 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ITCHQ96J02 903 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 HSFY1Q96LI6 401 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 TWNKQ96RR1 684 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 C2orf40Q9H1Z8 148 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ARHGAP28Q9P2N2 729 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ANGPTL3Q9Y5C1 460 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 PCDHB3Q9Y5E6 796 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 BCLAF3A2AJT9 711 aaKnown RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 TOMM70O94826 608 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 RASAL1O95294 804 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 FOXD4Q12950 439 aaPredicted RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ADPRMQ3LIE5 342 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 GRTP1Q5TC63 336 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 SLC16A12Q6ZSM3 486 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 MFSD4AQ8N468 514 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ANKK1Q8NFD2 765 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 CNPY3Q9BT09 278 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 PRRG3Q9BZD7 231 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 SMURF2Q9HAU4 748 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ENPP5Q9UJA9 477 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 PMF1-BGLAPU3KQ54 211 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 CPNE6O95741 557 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF132P52740 706 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 LIMK2P53671 638 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 GJA9P57773 515 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 PYCR3Q53H96 274 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ADGRG5Q8IZF4 528 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 HS3ST5Q8IZT8 346 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 SAMD3Q8N6K7 520 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 BEND7Q8N7W2 519 aaPredicted RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 TRPV3Q8NET8 790 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 SLC22A17Q8WUG5 538 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 S100ZQ8WXG8 99 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 EXT2Q93063 718 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 HEXIM2Q96MH2 286 aaKnown RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 CGRRF1Q99675 332 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 CPNE1Q99829 537 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 TUBA1CQ9BQE3 449 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 SPON1Q9HCB6 807 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 MOV10Q9HCE1 1003 aaKnown RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ARPC2O15144 300 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 NDUFS2O75306 463 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 CD4P01730 458 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ITIH1P19827 911 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ARNTP27540 789 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 MAP2K4P45985 399 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 APLP1P51693 650 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ILF2Q12905 390 aaKnown RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 KRT33BQ14525 404 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 DGUOKQ16854 277 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 CERCAMQ5T4B2 595 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 CCSAPQ6IQ19 270 aaPredicted RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 TP53I13Q8NBR0 393 aaPredicted RBP7.48□□□□□ -1.21
CPSF6-202ENST00000435070 OMA1Q96E52 524 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF518BQ9C0D4 1074 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 ARMC1Q9NVT9 282 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 VTI1BQ9UEU0 232 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 PTGDR2Q9Y5Y4 395 aa7.48□□□□□ -1.21
CPSF6-202ENST00000435070 IFI30P13284 250 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ALDH7A1P49419 539 aaKnown RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 BCAT1P54687 386 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TNFAIP2Q03169 654 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 MAPRE2Q15555 327 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 HABP4Q5JVS0 413 aaKnown RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 STYK1Q6J9G0 422 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CCBE1Q6UXH8 406 aaPredicted RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 DCP2Q8IU60 420 aaKnown RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 C4orf19Q8IY42 314 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ANKRD52Q8NB46 1076 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 SPPL2BQ8TCT7 592 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF560Q96MR9 790 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 SLC25A23Q9BV35 468 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 BEX2Q9BXY8 128 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 RAVER2Q9HCJ3 691 aaKnown RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CHST12Q9NRB3 414 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 PAQR5Q9NXK6 330 aaPredicted RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 GGA3Q9NZ52 723 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TMEM181Q9P2C4 612 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TESMINQ9Y4I5 508 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 PAPPAQ13219 1627 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 LOC105371267A0A1B0GV96 52 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 FBXW4P57775 412 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 GNG2P59768 71 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 APOBEC3HQ6NTF7 200 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms