RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 NOXA1Q86UR1 476 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 KMT5CQ86Y97 462 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 C1orf87Q8N0U7 546 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 MAPK1IP1LQ8NDC0 245 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 MAGEC3Q8TD91 643 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 LGALS12Q96DT0 336 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 CDCA5Q96FF9 252 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 C17orf77Q96MU5 243 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 KXD1Q9BQD3 176 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 SLC32A1Q9H598 525 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 CNGB3Q9NQW8 809 aa3.64□□□□□ -1.83
PTPN4-205ENST00000433888 IGKV3D-20A0A0C4DH25 116 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 PMS2P5A8MQ11 134 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 EXTL3O43909 919 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 MTA2O94776 668 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 PAX1P15863 534 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 ITGA2P17301 1181 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 CD58P19256 250 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 HOXC13P31276 330 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 ACTR2P61160 394 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 RUNX2Q13950 521 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 SGO1Q5FBB7 561 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 IRAK1BP1Q5VVH5 260 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 ZNF772Q68DY9 489 aaPredicted RBP3.63□□□□□ -1.83
PTPN4-205ENST00000433888 KRBA2Q6ZNG9 492 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 ZNF34Q8IZ26 560 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 AGBL3Q8NEM8 1001 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 KLHDC9Q8NEP7 349 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 POF1BQ8WVV4 589 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 CNOT9Q92600 299 aaKnown RBP3.63□□□□□ -1.83
PTPN4-205ENST00000433888 RUBCNQ92622 972 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 RILPL2Q969X0 211 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 ZNF524Q96C55 264 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 MXRA8Q9BRK3 442 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 POLR3GLQ9BT43 218 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 STN1Q9H668 368 aaKnown RBP3.63□□□□□ -1.83
PTPN4-205ENST00000433888 MKKSQ9NPJ1 570 aaPredicted RBP3.63□□□□□ -1.83
PTPN4-205ENST00000433888 KIF17Q9P2E2 1029 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 GDAQ9Y2T3 454 aa3.63□□□□□ -1.83
PTPN4-205ENST00000433888 SH2D7A6NKC9 451 aaPredicted RBP3.62□□□□□ -1.83
PTPN4-205ENST00000433888 AKR1B15C9JRZ8 316 aaPredicted RBP3.62□□□□□ -1.83
PTPN4-205ENST00000433888 BAG4O95429 457 aaKnown RBP3.62□□□□□ -1.83
PTPN4-205ENST00000433888 TUBBP07437 444 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 PRSS1P07477 247 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 PCNAP12004 261 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 TMPOP42166 694 aaKnown RBP3.62□□□□□ -1.83
PTPN4-205ENST00000433888 YWHAZP63104 245 aaKnown RBP3.62□□□□□ -1.83
PTPN4-205ENST00000433888 TUBB4BP68371 445 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 CHRNDQ07001 517 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 TUBB8Q3ZCM7 444 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 MMEL1Q495T6 779 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 LCTLQ6UWM7 567 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 NOL8Q76FK4 1167 aaKnown RBP3.62□□□□□ -1.83
PTPN4-205ENST00000433888 MOGAT3Q86VF5 341 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 TMEM57Q8N5G2 664 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 SCCPDHQ8NBX0 429 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 DUSP19Q8WTR2 217 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 AFG1LQ8WV93 481 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 PPM1EQ8WY54 764 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 EPHX3Q9H6B9 360 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 RASSF1Q9NS23 344 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 HCFC1R1Q9NWW0 138 aa3.62□□□□□ -1.83
PTPN4-205ENST00000433888 ANP32CO43423 234 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 MMP2P08253 660 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 PATE4P0C8F1 98 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 SLC2A4P14672 509 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 NR1D1P20393 614 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 USP8P40818 1118 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 EIF2S3P41091 472 aaKnown RBP3.61□□□□□ -1.83
PTPN4-205ENST00000433888 POSTNQ15063 836 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 SYCP2LQ5T4T6 812 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 ZC2HC1BQ5TFG8 222 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 TRNP1Q6NT89 227 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 ZNF852Q6ZMS4 543 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 ZNF497Q6ZNH5 498 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 TAOK1Q7L7X3 1001 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 MYLK4Q86YV6 388 aaPredicted RBP3.61□□□□□ -1.83
PTPN4-205ENST00000433888 KIAA2013Q8IYS2 634 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 ZC3HAV1LQ96H79 300 aaKnown RBP3.61□□□□□ -1.83
PTPN4-205ENST00000433888 LRRC1Q9BTT6 524 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 PCGF6Q9BYE7 350 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 PLCB1Q9NQ66 1216 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 FEM1BQ9UK73 627 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 PADI1Q9ULC6 663 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 STON1Q9Y6Q2 735 aa3.61□□□□□ -1.83
PTPN4-205ENST00000433888 F5H423 210 aaPredicted RBP3.6□□□□□ -1.83
PTPN4-205ENST00000433888 CNPP09543 421 aaKnown RBP3.6□□□□□ -1.83
PTPN4-205ENST00000433888 ETFAP13804 333 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 EDN2P20800 178 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 AGAP20933 346 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 DDIT3P35638 169 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 CLCNKAP51800 687 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 ITGADQ13349 1161 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 CTF1Q16619 201 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 STXBP5Q5T5C0 1151 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 C1orf228Q6PIY5 440 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 NOTCH2NLQ7Z3S9 236 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 FAM160B2Q86V87 743 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 HERC6Q8IVU3 1022 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 RNF113BQ8IZP6 322 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms