RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 LTA4HP09960 611 aaKnown RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ODC1P11926 461 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ENO3P13929 434 aaPredicted RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 TPH1P17752 444 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PMLP29590 882 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ADRA1AP35348 466 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ACADVLP49748 655 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PSME3P61289 254 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PFKPQ01813 784 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 TRIM25Q14258 630 aaKnown RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PTK2BQ14289 1009 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PPP2R5DQ14738 602 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ACAP2Q15057 778 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 SLC14A2Q15849 920 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 KCNA10Q16322 511 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ACBD5Q5T8D3 534 aaPredicted RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 TWF2Q6IBS0 349 aaKnown RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 FAM45BPQ6NSW5 357 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PRMT9Q6P2P2 845 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 BLOC1S3Q6QNY0 202 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 B3GNT6Q6ZMB0 384 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 TRIM67Q6ZTA4 783 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 RNF180Q86T96 592 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 SLC41A1Q8IVJ1 513 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 CENPLQ8N0S6 344 aaPredicted RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PELI3Q8N2H9 469 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 CCNYL1Q8N7R7 359 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 RNF169Q8NCN4 708 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ZMIZ2Q8NF64 920 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 BHLHE22Q8NFJ8 381 aaPredicted RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 FAM45AQ8TCE6 357 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 GFM2Q969S9 779 aaKnown RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PBXIP1Q96AQ6 731 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ROPN1LQ96C74 230 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 NXNL1Q96CM4 212 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PCED1BQ96HM7 432 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ELMO2Q96JJ3 720 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PRICKLE1Q96MT3 831 aaPredicted RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 CATSPER2Q96P56 530 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 GCNAQ96QF7 691 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 SLC25A23Q9BV35 468 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 OSBPL11Q9BXB4 747 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 TRIM15Q9C019 465 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 CERS4Q9HA82 394 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 VPS45Q9NRW7 570 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ABCC13Q9NSE7 274 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 TREX1Q9NSU2 369 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 FBXO5Q9UKT4 447 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 TMCO1Q9UM00 188 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 DMTF1Q9Y222 760 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 GNEQ9Y223 722 aaKnown RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PCDHB3Q9Y5E6 796 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 AP4B1Q9Y6B7 739 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 USP24Q9UPU5 2620 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 TPRP12270 2363 aaKnown RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 E2F8A0AVK6 867 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 TCAF2A6NFQ2 919 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 MOXD2PA6NHM9 499 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 RNF223E7ERA6 249 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 UBDO15205 165 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 IPO13O94829 963 aaKnown RBP8.73□□□□□ -1.01
GABPB1-205ENST00000429662 VAPBO95292 243 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 IGLV3-25P01717 112 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 CYP11A1P05108 521 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 SNRPB2P08579 225 aaKnown RBP8.73□□□□□ -1.01
GABPB1-205ENST00000429662 MYL3P08590 195 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 CPB1P15086 417 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 XRCC1P18887 633 aaPredicted RBP8.73□□□□□ -1.01
GABPB1-205ENST00000429662 GABRB3P28472 473 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 CCR1P32246 355 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 LEPRP48357 1165 aaKnown RBP8.73□□□□□ -1.01
GABPB1-205ENST00000429662 NR1H2P55055 460 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 NKX3-2P78367 333 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 MRPS22P82650 360 aaKnown RBP8.73□□□□□ -1.01
GABPB1-205ENST00000429662 RHDQ02161 417 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 OLIG2Q13516 323 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 EIF4EBP2Q13542 120 aaPredicted RBP8.73□□□□□ -1.01
GABPB1-205ENST00000429662 CEACAM7Q14002 265 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 TLR1Q15399 786 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 LEXMQ3ZCV2 418 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 SAMD4BQ5PRF9 694 aaKnown RBP8.73□□□□□ -1.01
GABPB1-205ENST00000429662 KIAA0319Q5VV43 1072 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 DENND5AQ6IQ26 1287 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 RWDD4Q6NW29 188 aaKnown RBP8.73□□□□□ -1.01
GABPB1-205ENST00000429662 NEPROQ6NW34 567 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 FAM171BQ6P995 826 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 FBXL19Q6PCT2 694 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 RANBP10Q6VN20 620 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 BHLHA9Q7RTU4 235 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 TAC4Q86UU9 113 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 SPATA24Q86W54 205 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 TP53INP2Q8IXH6 220 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 THEM5Q8N1Q8 247 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 TMEM199Q8N511 208 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 PACRGLQ8N7B6 248 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 PCYOX1LQ8NBM8 494 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 DQX1Q8TE96 717 aaKnown RBP8.73□□□□□ -1.01
GABPB1-205ENST00000429662 LZICQ8WZA0 190 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 PEX13Q92968 403 aa8.73□□□□□ -1.01
GABPB1-205ENST00000429662 C1orf74Q96LT6 269 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms