RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ACADVLP49748 655 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 TFDP2Q14188 446 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 TFDP3Q5H9I0 405 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 UNQ6494/PRO21346Q6UXR6 183 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 USP45Q70EL2 814 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 CBARPQ8N350 705 aaPredicted RBP20.37■□□□□ 0.85
GTF3A-202ENST00000419181 SPC24Q8NBT2 197 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 PLA2G15Q8NCC3 412 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 KRT35Q92764 455 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 COQ10AQ96MF6 247 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 TMEM121BQ9BXQ6 578 aaPredicted RBP20.37■□□□□ 0.85
GTF3A-202ENST00000419181 BRD8Q9H0E9 1235 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 NLGN3Q9NZ94 848 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.37■□□□□ 0.85
GTF3A-202ENST00000419181 PCDHGA1Q9Y5H4 931 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 ASPMQ8IZT6 3477 aa20.37■□□□□ 0.85
GTF3A-202ENST00000419181 PLXNB3Q9ULL4 1909 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 NEMP2A6NFY4 417 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 C1QTNF9BB2RNN3 333 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 CST8O60676 142 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 ZRANB2O95218 330 aaKnown RBP eCLIP20.36■□□□□ 0.85
GTF3A-202ENST00000419181 C1QTNF9P0C862 333 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 CYP2A6P11509 494 aaPredicted RBP20.36■□□□□ 0.85
GTF3A-202ENST00000419181 CKMT2P17540 419 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 NR2C2P49116 596 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 ADCY2Q08462 1091 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 AP1B1Q10567 949 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 NFATC4Q14934 902 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 ACOX1Q15067 660 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 PTPRRQ15256 657 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 RCOR2Q8IZ40 523 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 EXD1Q8NHP7 514 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 BTN2A2Q8WVV5 523 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 GATA6Q92908 595 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 APOOQ9BUR5 198 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 SAE1Q9UBE0 346 aaPredicted RBP20.36■□□□□ 0.85
GTF3A-202ENST00000419181 APOBEC3BQ9UH17 382 aaKnown RBP20.36■□□□□ 0.85
GTF3A-202ENST00000419181 OR1A2Q9Y585 309 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 CSNK1G3Q9Y6M4 447 aa20.36■□□□□ 0.85
GTF3A-202ENST00000419181 hCG_1818297A0A087WSY0 165 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 PSMD11O00231 422 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 AQP9O43315 295 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 PRLP01236 227 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 PROS1P07225 676 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 MMP2P08253 660 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 C1SP09871 688 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 ALPIP09923 528 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 PECAM1P16284 738 aaPredicted RBP20.35■□□□□ 0.85
GTF3A-202ENST00000419181 TGM2P21980 687 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 CA4P22748 312 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 CTNNA1P35221 906 aaKnown RBP20.35■□□□□ 0.85
GTF3A-202ENST00000419181 LLGL1Q15334 1064 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 CCDC157Q569K6 752 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 KAZNQ674X7 775 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 ESRP1Q6NXG1 681 aaKnown RBP20.35■□□□□ 0.85
GTF3A-202ENST00000419181 TSPAN33Q86UF1 283 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 PHACTR4Q8IZ21 702 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 RBFAQ8N0V3 343 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 NDUFAF2Q8N183 169 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 RBM41Q96IZ5 413 aaKnown RBP20.35■□□□□ 0.85
GTF3A-202ENST00000419181 TBATAQ96M53 351 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 TCEAL2Q9H3H9 227 aaPredicted RBP20.35■□□□□ 0.85
GTF3A-202ENST00000419181 CHKBQ9Y259 395 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 USP24Q9UPU5 2620 aa20.35■□□□□ 0.85
GTF3A-202ENST00000419181 A0A0J9YYE9 177 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 K7ESM1 405 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 RFPL3O75679 317 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 TRBC1P01850 177 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 ALPPL2P10696 532 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 CTPS1P17812 591 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 HTR1BP28222 390 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 HNF1BP35680 557 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 TRIM23P36406 574 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 RPL26P61254 145 aaKnown RBP20.34■□□□□ 0.85
GTF3A-202ENST00000419181 SKOR1P84550 965 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 PPARDQ03181 441 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 ARHGEF7Q14155 803 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 PRKD1Q15139 912 aaPredicted RBP20.34■□□□□ 0.85
GTF3A-202ENST00000419181 PPP2R5EQ16537 467 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 HS1BP3Q53T59 392 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 DHRS13Q6UX07 377 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 BZW1Q7L1Q6 419 aaKnown RBP20.34■□□□□ 0.85
GTF3A-202ENST00000419181 TMPRSS7Q7RTY8 843 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 HSD11B1LQ7Z5J1 315 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 KIAA1328Q86T90 577 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 CCDC50Q8IVM0 306 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 PELI3Q8N2H9 469 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 LRRC57Q8N9N7 239 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 NUS1Q96E22 293 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 DTD2Q96FN9 168 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 SMIM14Q96QK8 99 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 LRRC61Q9BV99 259 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 DUSP23Q9BVJ7 150 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 CEP41Q9BYV8 373 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 PCDH9Q9HC56 1237 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 KCTD5Q9NXV2 234 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 SPASTQ9UBP0 616 aa20.34■□□□□ 0.85
GTF3A-202ENST00000419181 RPL26L1Q9UNX3 145 aaKnown RBP20.34■□□□□ 0.85
GTF3A-202ENST00000419181 CAPN8A6NHC0 703 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 CDK4P11802 303 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms