RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ZNF548Q8NEK5 533 aaPredicted RBP20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 C1QTNF7Q9BXJ2 289 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 KMT2BQ9UMN6 2715 aaPredicted RBP20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 SCAMP1O15126 338 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 ALPIP09923 528 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 ELFN1P0C7U0 828 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 DYNLT1P63172 113 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 SMAD1Q15797 465 aaKnown RBP20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 ZFYVE27Q5T4F4 411 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 ARMC12Q5T9G4 340 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 HSD11B1LQ7Z5J1 315 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 TECPR1Q7Z6L1 1165 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 CCNYQ8ND76 341 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 PDCD6IPQ8WUM4 868 aaKnown RBP20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 APOOQ9BUR5 198 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 OR1A2Q9Y585 309 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 PCDHGA1Q9Y5H4 931 aa20.67■□□□□ 0.9
PKNOX1-202ENST00000418336 IGF2RP11717 2491 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 A0A0J9YYE9 177 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 GRID2IPA4D2P6 1211 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 C1QTNF9BB2RNN3 333 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 K7ESM1 405 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 CST8O60676 142 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 GCATO75600 419 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 NEBLO76041 1014 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 TRBC1P01850 177 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 PCCBP05166 539 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 C1QTNF9P0C862 333 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 ZFXP17010 805 aaPredicted RBP20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 CES1P23141 567 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 ACP1P24666 158 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 HNF1BP35680 557 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 HNRNPKP61978 463 aaKnown RBP eCLIP20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 MTM1Q13496 603 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 LLGL1Q15334 1064 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 TFDP3Q5H9I0 405 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 ESRP1Q6NXG1 681 aaKnown RBP20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 CRTC1Q6UUV9 634 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 RFLNAQ6ZTI6 216 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 TMPRSS7Q7RTY8 843 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 DAAM2Q86T65 1068 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 SPC24Q8NBT2 197 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 EXD1Q8NHP7 514 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 TBATAQ96M53 351 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 TRIB3Q96RU7 358 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 LRRC61Q9BV99 259 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 CLPBQ9H078 707 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 NLGN3Q9NZ94 848 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 TRIM10Q9UDY6 481 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 PCDHA3Q9Y5H8 950 aa20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 COL27A1Q8IZC6 1860 aaPredicted RBP20.66■□□□□ 0.9
PKNOX1-202ENST00000418336 LZTS3O60299 673 aaPredicted RBP20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 SOD1P00441 154 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 JUNDP17535 347 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 CTPS1P17812 591 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 CTNNA2P26232 953 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 KIAA1024LP59773 190 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 PTSQ03393 145 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 WASHC5Q12768 1159 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 NFATC4Q14934 902 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 PDK1Q15118 436 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 PPP2R5EQ16537 467 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 ALG11Q2TAA5 492 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 CCNI2Q6ZMN8 369 aaPredicted RBP20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 MARCH9Q86YJ5 346 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 PHACTR4Q8IZ21 702 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 RCOR2Q8IZ40 523 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 FAM181AQ8N9Y4 354 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 ALG3Q92685 438 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 DTD2Q96FN9 168 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 LYSMD1Q96S90 227 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 LGR4Q9BXB1 951 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 CEP41Q9BYV8 373 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 CHKBQ9Y259 395 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 CSNK1G3Q9Y6M4 447 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 ZFHX4Q86UP3 3567 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 CELSR3Q9NYQ7 3312 aa20.65■□□□□ 0.9
PKNOX1-202ENST00000418336 TMEM202A6NGA9 273 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 GOLGA8CPA6NN73 597 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 PSMD11O00231 422 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 FFAR2O15552 330 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 CELA2BP08218 269 aaPredicted RBP20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 HOXC4P09017 264 aaPredicted RBP20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 CKMT2P17540 419 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 TGM2P21980 687 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 CD68P34810 354 aaPredicted RBP20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 ETV3P41162 512 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 NR2C2P49116 596 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 CLDN6P56747 220 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 ITKQ08881 620 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 AP1B1Q10567 949 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 CAMK2BQ13554 666 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 PTK2BQ14289 1009 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 PNCKQ6P2M8 343 aa20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 IMP4Q96G21 291 aaKnown RBP20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 CALR3Q96L12 384 aaKnown RBP20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 ZNF830Q96NB3 372 aaPredicted RBP20.64■□□□□ 0.89
PKNOX1-202ENST00000418336 DESI2Q9BSY9 194 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms