RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 GOLGA6L10A0A0M3HER8 536 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 RGSL1A5PLK6 1076 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 NPIPB15A6NHN6 443 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-206ENST00000414829 ANKRD66B4E2M5 251 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 PDE2AO00408 941 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-206ENST00000414829 WNT9AO14904 365 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 PMPCBO75439 489 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 RECQL5O94762 991 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-206ENST00000414829 FGF1P05230 155 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 ITGAVP06756 1048 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 KELP23276 732 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 HTR1BP28222 390 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 CD68P34810 354 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-206ENST00000414829 THOP1P52888 689 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 FGL2Q14314 439 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 PUM1Q14671 1186 aaKnown RBP eCLIP14.67□□□□□ -0.06
LIMS1-206ENST00000414829 CNGA3Q16281 694 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 PCSK7Q16549 785 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 CCNG2Q16589 344 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 LONRF2Q1L5Z9 754 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 ZNF423Q2M1K9 1284 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 HLA-BQ31612 363 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 ANKRD20A2Q5SQ80 823 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 ANKRD20A1Q5TYW2 823 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 ANKRD20A3Q5VUR7 823 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 GCNT7Q6ZNI0 430 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 ZNF765Q7L2R6 523 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 PARGQ86W56 976 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 SLC35F6Q8N357 371 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 CCDC89Q8N998 374 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 FAM71DQ8N9W8 422 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 CENPTQ96BT3 561 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 NUS1Q96E22 293 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 TRIB3Q96RU7 358 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 ELF4Q99607 663 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-206ENST00000414829 KLF6Q99612 283 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-206ENST00000414829 MYOCQ99972 504 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 MAGEE1Q9HCI5 957 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 FZD3Q9NPG1 666 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 HACD3Q9P035 362 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 FEZ2Q9UHY8 353 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-206ENST00000414829 TTC7AQ9ULT0 858 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-206ENST00000414829 ZNF148Q9UQR1 794 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 SNX11Q9Y5W9 270 aa14.67□□□□□ -0.06
LIMS1-206ENST00000414829 C4orf47A7E2U8 309 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 H3BM21 787 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 PGRMC1O00264 195 aaKnown RBP14.66□□□□□ -0.06
LIMS1-206ENST00000414829 CDX4O14627 284 aaPredicted RBP14.66□□□□□ -0.06
LIMS1-206ENST00000414829 ENC1O14682 589 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 PSMD3O43242 534 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 GCATO75600 419 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 PRLP01236 227 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 PRKCGP05129 697 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 PDHA1P08559 390 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 TSHRP16473 764 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 TEAD1P28347 426 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 HNF1BP35680 557 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 WNT3AP56704 352 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 PFN3P60673 137 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 GNG11P61952 73 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 IRF4Q15306 451 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 QPCTQ16769 361 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 PARP6Q2NL67 630 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 ZDHHC20Q5W0Z9 365 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 LRRC66Q68CR7 880 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 ESRP1Q6NXG1 681 aaKnown RBP14.66□□□□□ -0.06
LIMS1-206ENST00000414829 Q6ZSR6 202 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 B4GALNT4Q76KP1 1039 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 NRSN1Q8IZ57 195 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 TP53I13Q8NBR0 393 aaPredicted RBP14.66□□□□□ -0.06
LIMS1-206ENST00000414829 OR13H1Q8NG92 308 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 SPATA22Q8NHS9 363 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 DTD2Q96FN9 168 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 COQ10AQ96MF6 247 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 NSMCE3Q96MG7 304 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 FAM118BQ9BPY3 351 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 TMEM121Q9BTD3 319 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 SLC32A1Q9H598 525 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 USP29Q9HBJ7 922 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 GPR27Q9NS67 375 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 PKD2L2Q9NZM6 624 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 SNX12Q9UMY4 172 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 SLCO1B1Q9Y6L6 691 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 SDK1Q7Z5N4 2213 aa14.66□□□□□ -0.06
LIMS1-206ENST00000414829 NUMA1Q14980 2115 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 TNRC6BQ9UPQ9 1833 aaKnown RBP14.65□□□□□ -0.06
LIMS1-206ENST00000414829 C1orf232A0A0U1RR37 186 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 ERI2A8K979 691 aaKnown RBP14.65□□□□□ -0.06
LIMS1-206ENST00000414829 CACNB4O00305 520 aaPredicted RBP14.65□□□□□ -0.06
LIMS1-206ENST00000414829 RAD51BO15315 384 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 FLRT2O43155 660 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 PCDHGA12O60330 932 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 MT-CYBP00156 380 aaPredicted RBP14.65□□□□□ -0.06
LIMS1-206ENST00000414829 WNT1P04628 370 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 CTPS1P17812 591 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 LHCGRP22888 699 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 IGFALSP35858 605 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 RXRGP48443 463 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 BLKP51451 505 aa14.65□□□□□ -0.06
LIMS1-206ENST00000414829 STC1P52823 247 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms