RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ZBTB2Q8N680 514 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 HUS1BQ8NHY5 278 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 UCMAQ8WVF2 138 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 GTF3C6Q969F1 213 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 PERPQ96FX8 193 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 TXNDC15Q96J42 360 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZNF479Q96JC4 524 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 SLC6A13Q9NSD5 602 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 CISD1Q9NZ45 108 aaKnown RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 AAR2Q9Y312 384 aaKnown RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 HMGXB3Q12766 1538 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 USO1O60763 962 aaKnown RBP3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 KCNJ13O60928 360 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 SERPINI2O75830 405 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 GAGE7O76087 117 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 SCGB1D1O95968 90 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 SPARCP09486 303 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 GAGE12FP0CL80 117 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 GAGE12GP0CL81 117 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 GAGE12IP0CL82 117 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 LAMP2P13473 410 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 CAPN3P20807 821 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 MAOAP21397 527 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 DCAF7P61962 342 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 BNC1Q01954 994 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 LTBQ06643 244 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 GAGE1Q13065 139 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 GAGE4Q13068 117 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 TRAF3Q13114 568 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 EFNB3Q15768 340 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 TYW3Q6IPR3 259 aaKnown RBP3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 FAM180BQ6P0A1 224 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 FBXO46Q6PJ61 603 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 GSTA5Q7RTV2 222 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 CPLX4Q7Z7G2 160 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 TBC1D1Q86TI0 1168 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 ADSSL1Q8N142 457 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 TMEM116Q8NCL8 245 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 KCNG4Q8TDN1 519 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 SMARCE1Q969G3 411 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 SH3GL2Q99962 352 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 SEZ6LQ9BYH1 1024 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 MUC13Q9H3R2 512 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 SMC4Q9NTJ3 1288 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 SELENONQ9NZV5 590 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 LIMA1Q9UHB6 759 aaKnown RBP3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 SLCO3A1Q9UIG8 710 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 FBXO9Q9UK97 447 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 MKLN1Q9UL63 735 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 KCNE2Q9Y6J6 123 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 CEPT1Q9Y6K0 416 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 PIAS3Q9Y6X2 628 aa3.88□□□□□ -1.79
HMGB1P11-201ENST00000413899 ATAD2BQ9ULI0 1458 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 IGLV5-52A0A0A0MRZ9 124 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 PGPEP1LA6NFU8 196 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 EIF3CLB5ME19 914 aaKnown RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 FTCDO95954 541 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 PRSS2P07478 247 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 NGFRP08138 427 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZNF12P17014 697 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 CDH2P19022 906 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 METAP2P50579 478 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 SEC61A1P61619 476 aaKnown RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 CSTF3Q12996 717 aaKnown RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 NAE1Q13564 534 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 SIM2Q14190 667 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 KRT32Q14532 448 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 DRAP1Q14919 205 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 PLCB4Q15147 1175 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 MAPRE1Q15691 268 aaKnown RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 C2orf68Q2NKX9 166 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 COL28A1Q2UY09 1125 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 SOWAHCQ53LP3 525 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 SNX30Q5VWJ9 437 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 METTL2BQ6P1Q9 378 aaKnown RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 NCEH1Q6PIU2 408 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 PXKQ7Z7A4 578 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZC3HC1Q86WB0 502 aaKnown RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 SPATA2LQ8IUW3 424 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 NGEFQ8N5V2 710 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 MMABQ96EY8 250 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 METTL2AQ96IZ6 378 aaKnown RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 PPP1R13BQ96KQ4 1090 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 HAUS8Q9BT25 410 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 IFIH1Q9BYX4 1025 aaKnown RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 KIF9Q9HAQ2 790 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 FBRSL1Q9HCM7 1045 aaKnown RBP3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 CD93Q9NPY3 652 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 DIAPH3Q9NSV4 1193 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 DLGAP2Q9P1A6 1054 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 CDC14AQ9UNH5 594 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 ERVK-11Q9UQG0 969 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 PSAT1Q9Y617 370 aa3.87□□□□□ -1.79
HMGB1P11-201ENST00000413899 CCDC88BA6NC98 1476 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 ABCC8Q09428 1581 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 BIVM-ERCC5R4GMW8 1640 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 FAM237AA0A1B0GTK4 181 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 PI4KAP2A4QPH2 592 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms