RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 MEAF6Q9HAF1 191 aa14.63□□□□□ -0.07
SEMA3F-202ENST00000413852 PLGRKTQ9HBL7 147 aa14.63□□□□□ -0.07
SEMA3F-202ENST00000413852 UTP6Q9NYH9 597 aaKnown RBP14.63□□□□□ -0.07
SEMA3F-202ENST00000413852 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.63□□□□□ -0.07
SEMA3F-202ENST00000413852 IPO11Q9UI26 975 aaKnown RBP14.63□□□□□ -0.07
SEMA3F-202ENST00000413852 TTC3P53804 2025 aa14.63□□□□□ -0.07
SEMA3F-202ENST00000413852 PIP5K1BO14986 540 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 RPL34P49207 117 aaKnown RBP14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 DAOAP59103 153 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 IHHQ14623 411 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 TGFBIQ15582 683 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 CYP51A1Q16850 503 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 TAPT1Q6NXT6 567 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 LRRC52Q8N7C0 313 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 BPIFB6Q8NFQ5 453 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 SCAMP5Q8TAC9 235 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 HASPINQ8TF76 798 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 SLC2A13Q96QE2 648 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 FSD1LQ9BXM9 530 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 SLC39A8Q9C0K1 460 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 FAIMQ9NVQ4 179 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 GPRC5DQ9NZD1 345 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 PADI4Q9UM07 663 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 K7EPI3 171 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 NPHS1O60500 1241 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 GPX3P22352 226 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 EEF1B2P24534 225 aaKnown RBP14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 TAF6P49848 677 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 ESRRGP62508 458 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 ZBED5Q49AG3 693 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 SAMD4BQ5PRF9 694 aaKnown RBP14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 BNIPLQ7Z465 357 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 LRRC43Q8N309 656 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 TTC39CQ8N584 583 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 TBC1D15Q8TC07 691 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 DNAJB3Q8WWF6 145 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 PCED1BQ96HM7 432 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 VPS50Q96JG6 964 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 RBM22Q9NW64 420 aaKnown RBP eCLIP14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 CNOT11Q9UKZ1 510 aaKnown RBP14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 DGKBQ9Y6T7 804 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 MAGEB16A2A368 324 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 BAIAP3O94812 1187 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 PRKAA2P54646 552 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 SLC44A4Q53GD3 710 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 LARP4Q71RC2 724 aaKnown RBP eCLIP14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 C19orf60Q96EN9 201 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 HBEGFQ99075 208 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 HNRNPABQ99729 332 aaKnown RBP14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 UPF3AQ9H1J1 476 aaKnown RBP14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 EXD2Q9NVH0 621 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 TCAF1Q9Y4C2 921 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 FADS3Q9Y5Q0 445 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 DNAJC15Q9Y5T4 150 aa14.62□□□□□ -0.07
SEMA3F-202ENST00000413852 NCF1BA6NI72 391 aaPredicted RBP14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 NCF1CA8MVU1 366 aaPredicted RBP14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 UBXN8O00124 270 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 BMP10O95393 424 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 NCF1P14598 390 aaPredicted RBP14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 SLC26A2P50443 739 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 TMEM214Q6NUQ4 689 aaKnown RBP14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 RALGPS2Q86X27 583 aaPredicted RBP14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 PPHLN1Q8NEY8 458 aaKnown RBP14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 TRPC4APQ8TEL6 797 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 ADAMTS10Q9H324 1103 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 MID1IP1Q9NPA3 183 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 SBF1O95248 1867 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 ZFC3H1O60293 1989 aaKnown RBP14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 DNAJC25-GNG10A0A024R161 153 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 A0A087WXM4 84 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 FXYD1O00168 92 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 ARPC2O15144 300 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 ACOX3O15254 700 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 IST1P53990 364 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 UNC50Q53HI1 259 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 PRAMEF19Q5SWL8 479 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 ALKAL1Q6UXT8 129 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 SLC15A4Q8N697 577 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 ANKFN1Q8N957 763 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 C1orf50Q9BV19 199 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 SLC25A23Q9BV35 468 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 TUBB1Q9H4B7 451 aa14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 UBQLN1Q9UMX0 589 aaKnown RBP14.61□□□□□ -0.07
SEMA3F-202ENST00000413852 SLC22A2O15244 555 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 BMXP51813 675 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 PFKPQ01813 784 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 ADRM1Q16186 407 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 PFKFB4Q16877 469 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 HECTD2Q5U5R9 776 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 C16orf87Q6PH81 154 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 PDZD4Q76G19 769 aaPredicted RBP14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 PIWIL3Q7Z3Z3 882 aaKnown RBP14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 TFAP2DQ7Z6R9 452 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 C2CD4AQ8NCU7 369 aaPredicted RBP14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 TNIP3Q96KP6 325 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 MRGPRX2Q96LB1 330 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 GLOD4Q9HC38 313 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 PCDH12Q9NPG4 1184 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 BLOC1S6Q9UL45 172 aa14.6□□□□□ -0.07
SEMA3F-202ENST00000413852 NRCAMQ92823 1304 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms