RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	B4GALT6	Q9UBX8	382 aa		10.32	□□□□□ -0.76
ZNF3-205	ENST00000413658	CACNA1E	Q15878	2313 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	CAPN8	A6NHC0	703 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	LRRC72	A6NJI9	287 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	ERI2	A8K979	691 aa	Known RBP	10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	TP73	O15350	636 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	RAD51C	O43502	376 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	TSPAN6	O43657	245 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	RNGTT	O60942	597 aa	Known RBP	10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	USP12	O75317	370 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	HLA-DPA1	P20036	260 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	LHCGR	P22888	699 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	ACTN2	P35609	894 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	GRIA1	P42261	906 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	VPS41	P49754	854 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	CCR5	P51681	352 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	RPL6	Q02878	288 aa	Known RBP	10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	ELP6	Q0PNE2	266 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	DHX34	Q14147	1143 aa	Known RBP	10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	FGL2	Q14314	439 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	CNGA3	Q16281	694 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	SPDYC	Q5MJ68	293 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	SYCP2L	Q5T4T6	812 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	SWT1	Q5T5J6	900 aa	Known RBP	10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	SEL1L3	Q68CR1	1132 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	NEK5	Q6P3R8	708 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	CRTC1	Q6UUV9	634 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	LIPI	Q6XZB0	460 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	TSPAN33	Q86UF1	283 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	TRIM69	Q86WT6	500 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	HORMAD1	Q86X24	394 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	DEFB119	Q8N690	84 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	CADM4	Q8NFZ8	388 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	CPT1B	Q92523	772 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	EID2B	Q96D98	161 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	APOL2	Q9BQE5	337 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	TRIM51	Q9BSJ1	452 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	EPC1	Q9H2F5	836 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	LRRC40	Q9H9A6	602 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	EBF2	Q9HAK2	575 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	EIF2B3	Q9NR50	452 aa	Known RBP	10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	SPO11	Q9Y5K1	396 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	PLXNB3	Q9ULL4	1909 aa		10.31	□□□□□ -0.76
ZNF3-205	ENST00000413658	TBC1D3D	A0A087WVF3	549 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TBC1D3I	A0A087WXS9	549 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TBC1D3E	A0A087X179	549 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TBC1D3K	A0A087X1G2	549 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658		A0A1W2PQU0	124 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	CCDC189	A1A4V9	331 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	IGLON5	A6NGN9	336 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	FAM47DP	A6NHR8	397 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	METTL12	A8MUP2	240 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658		A8MX80	341 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TBC1D3L	B9A6J9	549 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	PSMD3	O43242	534 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	MMP20	O60882	483 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	NDUFS2	O75306	463 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	HEXIM1	O94992	359 aa	Known RBP	10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	PCDH8	O95206	1070 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	FGF1	P05230	155 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	APRT	P07741	180 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TBC1D3H	P0C7X1	549 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	PIRT	P0C851	137 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TPSB2	P20231	275 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	XPA	P23025	273 aa	Predicted RBP	10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	VIPR1	P32241	457 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	LIG3	P49916	1009 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	EPHB1	P54762	984 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	PTPN5	P54829	565 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	MRPS25	P82663	173 aa	Known RBP	10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	CREB5	Q02930	508 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	PTS	Q03393	145 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	PPP1R7	Q15435	360 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TERF2	Q15554	542 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TPSAB1	Q15661	275 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	ANKRD22	Q5VYY1	191 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	KIAA0895L	Q68EN5	471 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TBC1D3G	Q6DHY5	549 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TBC1D3C	Q6IPX1	549 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	KIAA1161	Q6NSJ0	714 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	ERAP2	Q6P179	960 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	USP45	Q70EL2	814 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	ZNF534	Q76KX8	674 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	C11orf74	Q86VG3	221 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TMEFF1	Q8IYR6	380 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	MMGT1	Q8N4V1	131 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	SLC25A41	Q8N5S1	370 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	NOA1	Q8NC60	698 aa	Known RBP	10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	C1orf216	Q8TAB5	229 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	ITFG2	Q969R8	447 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	BIRC7	Q96CA5	298 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	RMDN1	Q96DB5	314 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	COQ10A	Q96MF6	247 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	FAM210A	Q96ND0	272 aa		10.3	□□□□□ -0.76
ZNF3-205	ENST00000413658	WRAP53	Q9BUR4	548 aa	Known RBP	10.3	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms