RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 RBM15Q96T37 977 aaKnown RBP eCLIP16.84■□□□□ 0.29
PMS2P4-201ENST00000412466 PCDH9Q9HC56 1237 aa16.84■□□□□ 0.29
PMS2P4-201ENST00000412466 PHTF1Q9UMS5 762 aa16.84■□□□□ 0.29
PMS2P4-201ENST00000412466 PCDHGC4Q9Y5F7 938 aa16.84■□□□□ 0.29
PMS2P4-201ENST00000412466 RAI2Q9Y5P3 530 aa16.84■□□□□ 0.29
PMS2P4-201ENST00000412466 MRFAP1Q9Y605 127 aa16.84■□□□□ 0.29
PMS2P4-201ENST00000412466 TTC24A2A3L6 582 aaPredicted RBP16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 PGLSO95336 258 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 ZNF883P0CG24 379 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 XPAP23025 273 aaPredicted RBP16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 DRD3P35462 400 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 ATRXP46100 2492 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 CNTN1Q12860 1018 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 DHX34Q14147 1143 aaKnown RBP16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 UGP2Q16851 508 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 DNTTIP2Q5QJE6 756 aaKnown RBP16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 NEK5Q6P3R8 708 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 MAATS1Q7Z4T9 603 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 TTC7BQ86TV6 843 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 PROSER1Q86XN7 944 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 ASPMQ8IZT6 3477 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 AADATQ8N5Z0 425 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 SETD7Q8WTS6 366 aaKnown RBP16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 IFT43Q96FT9 208 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 CAMK1GQ96NX5 476 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 SRPK1Q96SB4 655 aaKnown RBP16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 BTBD1Q9H0C5 482 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 PCED1AQ9H1Q7 454 aa16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 TPX2Q9ULW0 747 aaKnown RBP16.83■□□□□ 0.28
PMS2P4-201ENST00000412466 A0A1W2PP55 124 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 LRRC72A6NJI9 287 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 BCAT2O15382 392 aaPredicted RBP16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 AP1G1O43747 822 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 FZD6O60353 706 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 PIGNO95427 931 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 ADRB3P13945 408 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 CDK18Q07002 472 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 ELP6Q0PNE2 266 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 COL9A2Q14055 689 aaPredicted RBP16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 PPP1R7Q15435 360 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 ERAP2Q6P179 960 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 CACUL1Q86Y37 369 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 KLHDC8BQ8IXV7 354 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 SPATA22Q8NHS9 363 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 PDCD6IPQ8WUM4 868 aaKnown RBP16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 SNX19Q92543 992 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 FEM1CQ96JP0 617 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 TDRD1Q9BXT4 1180 aaKnown RBP16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 DDX47Q9H0S4 455 aaKnown RBP16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 NEUROG2Q9H2A3 272 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 PPIL1Q9Y3C6 166 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 ZZEF1O43149 2961 aa16.82■□□□□ 0.28
PMS2P4-201ENST00000412466 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 METTL12A8MUP2 240 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 MT-CYBP00156 380 aaPredicted RBP16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 KRT14P02533 472 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 TIMP2P16035 220 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 PSMB4P28070 264 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 RPL22P35268 128 aaKnown RBP16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 GRIA4P48058 902 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 EPHB1P54762 984 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 CDK16Q00536 496 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 DR1Q01658 176 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 TRAF2Q12933 501 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 PIP5KL1Q5T9C9 394 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 PARS2Q7L3T8 475 aaKnown RBP16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 GLRX5Q86SX6 157 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 LINC00523Q86TU6 105 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 KLHL7Q8IXQ5 586 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 CEP112Q8N8E3 955 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 ARRDC3Q96B67 414 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 SCRN2Q96FV2 425 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 NSMCE3Q96MG7 304 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 FSD1LQ9BXM9 530 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 CCDC86Q9H6F5 360 aaKnown RBP16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 GAREM1Q9H706 876 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 LRRC40Q9H9A6 602 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 TM7SF3Q9NS93 570 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 PCOLCE2Q9UKZ9 415 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 NEU2Q9Y3R4 380 aa16.81■□□□□ 0.28
PMS2P4-201ENST00000412466 BAHCC1Q9P281 2608 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 LOC285095A0A1B0GVY8 99 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 ANKRD66B4E2M5 251 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 E7EVH7 732 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 AP3B1O00203 1094 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 FLRT2O43155 660 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 TSPAN6O43657 245 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 PLRG1O43660 514 aaKnown RBP16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 PMPCBO75439 489 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 METTL18O95568 372 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 NDST3O95803 873 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 CPP00450 1065 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 HLA-DPA1P20036 260 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 WNT3AP56704 352 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 SEMA5AQ13591 1074 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 SUZ12Q15022 739 aaKnown RBP16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 TEAD4Q15561 434 aa16.8■□□□□ 0.28
PMS2P4-201ENST00000412466 POM121L1PQ3SYA9 428 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms