RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 GRIA1P42261 906 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 GLRBP48167 497 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 MTMR2Q13614 643 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SMU1Q2TAY7 513 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 GXYLT1Q4G148 440 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 PDCD4Q53EL6 469 aaKnown RBP7.4□□□□□ -1.22
PTPN3-203ENST00000412145 ZNF311Q5JNZ3 666 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 ARMCX6Q7L4S7 300 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 AGBL3Q8NEM8 1001 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SGCDQ92629 289 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 CLP1Q92989 425 aaKnown RBP7.4□□□□□ -1.22
PTPN3-203ENST00000412145 UNKQ9C0B0 810 aaKnown RBP7.4□□□□□ -1.22
PTPN3-203ENST00000412145 TMEM168Q9H0V1 697 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 TMEM27Q9HBJ8 222 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 POPDC2Q9HBU9 364 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SSU72Q9NP77 194 aaKnown RBP7.4□□□□□ -1.22
PTPN3-203ENST00000412145 TNFSF13BQ9Y275 285 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 WASHC1A8K0Z3 465 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 WASH3PC4AMC7 463 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SCELO95171 688 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 IFNA21P01568 189 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 DPEP1P16444 411 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 ITGA3P26006 1051 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 NOS2P35228 1153 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 GABRB2P47870 512 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SEC23AQ15436 765 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 AP5B1Q2VPB7 878 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 BAIAP2L2Q6UXY1 529 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 WASH2PQ6VEQ5 465 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SLCO6A1Q86UG4 719 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 RASAL3Q86YV0 1011 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 HPS6Q86YV9 775 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 CDYL2Q8N8U2 506 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 DENND6BQ8NEG7 585 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 C11orf24Q96F05 449 aaPredicted RBP7.4□□□□□ -1.22
PTPN3-203ENST00000412145 ANKRA2Q9H9E1 313 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 TMEM5Q9Y2B1 443 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 CLDN25C9JDP6 229 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 TACSTD2P09758 323 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 ELF3P78545 371 aaPredicted RBP7.4□□□□□ -1.22
PTPN3-203ENST00000412145 MVKQ03426 396 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 FAM153CQ494X1 144 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 C4orf19Q8IY42 314 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 BPIFB6Q8NFQ5 453 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 ATXN3LQ9H3M9 355 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 CDHR5Q9HBB8 845 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 TBC1D24Q9ULP9 559 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 WASF3Q9UPY6 502 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SPATA31E1Q6ZUB1 1445 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SETBP1Q9Y6X0 1596 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 KCNK1O00180 336 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SPIBQ01892 262 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 ZNF844Q08AG5 666 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 AKIRIN2Q53H80 203 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 FRMD7Q6ZUT3 714 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SDR16C5Q8N3Y7 309 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 GLB1L3Q8NCI6 653 aaPredicted RBP7.4□□□□□ -1.22
PTPN3-203ENST00000412145 TRPM4Q8TD43 1214 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 GIPC3Q8TF64 312 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 KAT2AQ92830 837 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 RNF31Q96EP0 1072 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 TUBA1CQ9BQE3 449 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 ZNF670Q9BS34 389 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SYT4Q9H2B2 425 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 TRMT13Q9NUP7 481 aaKnown RBP7.4□□□□□ -1.22
PTPN3-203ENST00000412145 QRICH2Q9H0J4 1663 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 SPATA31A1Q5TZJ5 1347 aa7.4□□□□□ -1.22
PTPN3-203ENST00000412145 USP32Q8NFA0 1604 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 PRORSD1PA6NEY8 169 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 PPP1R3GB7ZBB8 358 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 UBXN7O94888 489 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 FAM228BP0C875 321 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 ACO1P21399 889 aaKnown RBP7.4□□□□□ -1.23
PTPN3-203ENST00000412145 ZNF234Q14588 700 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 MTF1Q14872 753 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 PRAMEF18Q5VWM3 479 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 LPCAT1Q8NF37 534 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 OR2L5Q8NG80 312 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 MTG1Q9BT17 334 aaPredicted RBP7.4□□□□□ -1.23
PTPN3-203ENST00000412145 SLC22A4Q9H015 551 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 TRAF6Q9Y4K3 522 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 ALG5Q9Y673 324 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 IQGAP3Q86VI3 1631 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 SPHKAPQ2M3C7 1700 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 PSIP1O75475 530 aaKnown RBP7.4□□□□□ -1.23
PTPN3-203ENST00000412145 LARGE1O95461 756 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 NADKO95544 446 aaPredicted RBP7.4□□□□□ -1.23
PTPN3-203ENST00000412145 JCHAINP01591 159 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 MSL3P1P0C860 447 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 OR1E1P30953 314 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 SREBF1P36956 1147 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 ELK3P41970 407 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 SCNN1BP51168 640 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 SLC7A2P52569 658 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 NEPROQ6NW34 567 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 RBFAQ8N0V3 343 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 GPER1Q99527 375 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 CYP4F12Q9HCS2 524 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 DNAJB4Q9UDY4 337 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 RPTORQ8N122 1335 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms