RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 CAPSQ13938 189 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 BAATQ14032 418 aaPredicted RBP4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 ARHGEF6Q15052 776 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 TMEM266Q2M3C6 531 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 CDONQ4KMG0 1287 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 DCAF6Q58WW2 860 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 BMP2KLQ5H9B9 411 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 SPECC1Q5M775 1068 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 TSPAN33Q86UF1 283 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 DNAAF5Q86Y56 855 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 ANKRD13BQ86YJ7 626 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 LINC00346Q8IVM7 164 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 ZBTB2Q8N680 514 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 CEP76Q8TAP6 659 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 MSI2Q96DH6 328 aaKnown RBP4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 VCPIP1Q96JH7 1222 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 RADILQ96JH8 1075 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 ZFYVE19Q96K21 471 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 HARBI1Q96MB7 349 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 IFIH1Q9BYX4 1025 aaKnown RBP4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 NPFFR1Q9GZQ6 430 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 LHPPQ9H008 270 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 RIOX1Q9H6W3 641 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 MAP6D1Q9H9H5 199 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 DDX4Q9NQI0 724 aaKnown RBP4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 MSRB1Q9NZV6 116 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 CWC15Q9P013 229 aaKnown RBP4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 EXO1Q9UQ84 846 aaKnown RBP4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 ERVK-11Q9UQG0 969 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 NFE2L3Q9Y4A8 694 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 COX11Q9Y6N1 276 aa4.17□□□□□ -1.74
RNU2-28P-201ENST00000410457 LOC100509620A0A075B734 347 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 TMEM202A6NGA9 273 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 A6NNC1 897 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 A8MV72 311 aaPredicted RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 STMND1H3BQB6 276 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 PAPSS1O43252 624 aaPredicted RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 MITFO75030 526 aaPredicted RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 ATG13O75143 517 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 JRKO75564 520 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 IFNA2P01563 188 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 TUBBP07437 444 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 CHRNB2P17787 502 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 GPTP24298 496 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 CLCN3P51790 818 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 TAS2R40P59535 323 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 TGFB2P61812 414 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 MRPS34P82930 218 aaKnown RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 ST3GAL1Q11201 340 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 NAE1Q13564 534 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 TNFAIP1Q13829 316 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 INPP5JQ15735 1006 aaPredicted RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 EPHA10Q5JZY3 1008 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 KRT79Q5XKE5 535 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 FBXO46Q6PJ61 603 aaPredicted RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 CRELD2Q6UXH1 353 aaPredicted RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 RD3Q7Z3Z2 195 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 ANKRD23Q86SG2 305 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 PRIMA1Q86XR5 153 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 GPSM1Q86YR5 675 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 EPHX4Q8IUS5 362 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 MCEMP1Q8IX19 187 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 SYT2Q8N9I0 419 aaPredicted RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 POMGNT2Q8NAT1 580 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 AVL9Q8NBF6 648 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 SCCPDHQ8NBX0 429 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 KCTD6Q8NC69 237 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 GABPB2Q8TAK5 448 aaPredicted RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 SLC35F5Q8WV83 523 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 LRRC59Q96AG4 307 aaKnown RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 MOAP1Q96BY2 351 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 CHFRQ96EP1 664 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 RRNAD1Q96FB5 475 aaKnown RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 CNDP2Q96KP4 475 aaKnown RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 PPP1R13BQ96KQ4 1090 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 ZMAT2Q96NC0 199 aaKnown RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 WDR77Q9BQA1 342 aaPredicted RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 SRSF8Q9BRL6 282 aaKnown RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 MSTO1Q9BUK6 570 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 APOL6Q9BWW8 343 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 PRSS22Q9GZN4 317 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 OR10A4Q9H209 315 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 OSGEPL1Q9H4B0 414 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 CYSLTR2Q9NS75 346 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 TMEM184CQ9NVA4 438 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 PSD3Q9NYI0 1048 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 BCCIPQ9P287 314 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 CPSF2Q9P2I0 782 aaKnown RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 PADI1Q9ULC6 663 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 PCDHA12Q9UN75 941 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 CMAHPQ9Y471 501 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 RAI2Q9Y5P3 530 aa4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 MAGED1Q9Y5V3 778 aaPredicted RBP4.16□□□□□ -1.74
RNU2-28P-201ENST00000410457 ZMYM2Q9UBW7 1377 aa4.15□□□□□ -1.74
RNU2-28P-201ENST00000410457 ZNF814B7Z6K7 855 aa4.15□□□□□ -1.75
RNU2-28P-201ENST00000410457 AKR1B15C9JRZ8 316 aaPredicted RBP4.15□□□□□ -1.75
RNU2-28P-201ENST00000410457 CHL1O00533 1208 aa4.15□□□□□ -1.75
RNU2-28P-201ENST00000410457 RGS11O94810 467 aa4.15□□□□□ -1.75
RNU2-28P-201ENST00000410457 APOA4P06727 396 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms