RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 MYCP01106 439 aaPredicted RBP17.93■□□□□ 0.46
CHTOP-205ENST00000403433 JUNP05412 331 aaKnown RBP17.93■□□□□ 0.46
CHTOP-205ENST00000403433 IRF1P10914 325 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 HMGA1P17096 107 aaKnown RBP17.93■□□□□ 0.46
CHTOP-205ENST00000403433 ATP6V1C1P21283 382 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 FDXRP22570 491 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 ADSLP30566 484 aaPredicted RBP17.93■□□□□ 0.46
CHTOP-205ENST00000403433 BTKQ06187 659 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 TBL3Q12788 808 aaKnown RBP17.93■□□□□ 0.46
CHTOP-205ENST00000403433 PLD1Q13393 1074 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 PTPRCAPQ14761 206 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 GPR158Q5T848 1215 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 SDCCAG8Q86SQ7 713 aaPredicted RBP17.93■□□□□ 0.46
CHTOP-205ENST00000403433 SNX32Q86XE0 403 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 PPFIBP2Q8ND30 876 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 OR13C4Q8NGS5 318 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 CATSPER2Q96P56 530 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 SCUBE2Q9NQ36 999 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 ANKRD36A6QL64 1941 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 BPTFQ12830 3046 aa17.93■□□□□ 0.46
CHTOP-205ENST00000403433 A0A1B0GVM2 712 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 RGSL1A5PLK6 1076 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 TCAF2A6NFQ2 919 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 TMEM233B4DJY2 109 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 FKBP6O75344 327 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 KLKB1P03952 638 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 HNRNPLP14866 589 aaKnown RBP eCLIP17.92■□□□□ 0.46
CHTOP-205ENST00000403433 ACADSP16219 412 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 KCNA5P22460 613 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 PMLP29590 882 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 ALDH1A3P47895 512 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 SCNN1BP51168 640 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 TRIM68Q6AZZ1 485 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.92■□□□□ 0.46
CHTOP-205ENST00000403433 RNF168Q8IYW5 571 aaPredicted RBP17.92■□□□□ 0.46
CHTOP-205ENST00000403433 OR4L1Q8NH43 312 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 NRG4Q8WWG1 115 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 ZNF333Q96JL9 665 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 CLSTN3Q9BQT9 956 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 ZNF385DQ9H6B1 395 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 ALG9Q9H6U8 611 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 CWH43Q9H720 699 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 HSFX1Q9UBD0 423 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 INSIG1O15503 277 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 ANPEPP15144 967 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 NUDT2P50583 147 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 SGSHP51688 502 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 PLK1P53350 603 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 ATN1P54259 1190 aaPredicted RBP17.92■□□□□ 0.46
CHTOP-205ENST00000403433 SATB1Q01826 763 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 SULT2A1Q06520 285 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 VEPH1Q14D04 833 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 SPOUT1Q5T280 376 aaKnown RBP17.92■□□□□ 0.46
CHTOP-205ENST00000403433 PGM2L1Q6PCE3 622 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 TMEM207Q6UWW9 146 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 SPNS2Q8IVW8 549 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 RP9Q8TA86 221 aaKnown RBP17.92■□□□□ 0.46
CHTOP-205ENST00000403433 ZNF461Q8TAF7 563 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 RMDN1Q96DB5 314 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 EXOC2Q96KP1 924 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 DEFB118Q96PH6 123 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 DDX50Q9BQ39 737 aaKnown RBP17.92■□□□□ 0.46
CHTOP-205ENST00000403433 GKN1Q9NS71 199 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 ARIH1Q9Y4X5 557 aaPredicted RBP17.92■□□□□ 0.46
CHTOP-205ENST00000403433 YIPF1Q9Y548 306 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 TRIM17Q9Y577 477 aa17.92■□□□□ 0.46
CHTOP-205ENST00000403433 CBX4O00257 560 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 MAP3K7O43318 606 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 RGRP47804 291 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 ERFP50548 548 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 ZNF140P52738 457 aaPredicted RBP17.91■□□□□ 0.46
CHTOP-205ENST00000403433 CYLC2Q14093 348 aaPredicted RBP17.91■□□□□ 0.46
CHTOP-205ENST00000403433 SEMA3AQ14563 771 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 HERC3Q15034 1050 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 ADGRF1Q5T601 910 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 TMEM198Q66K66 360 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 TPGS2Q68CL5 300 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 AAGABQ6PD74 315 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 C16orf89Q6UX73 402 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 GLT6D1Q7Z4J2 308 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 JADE3Q92613 823 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 CCDC124Q96CT7 223 aaKnown RBP17.91■□□□□ 0.46
CHTOP-205ENST00000403433 PHF21BQ96EK2 531 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 MYRFLQ96LU7 910 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 MUC3BQ9H195 1237 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 POPDC3Q9HBV1 291 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 NLE1Q9NVX2 485 aaPredicted RBP17.91■□□□□ 0.46
CHTOP-205ENST00000403433 NDE1Q9NXR1 346 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 AGO1Q9UL18 857 aaKnown RBP17.91■□□□□ 0.46
CHTOP-205ENST00000403433 FIS1Q9Y3D6 152 aa17.91■□□□□ 0.46
CHTOP-205ENST00000403433 SDHDO14521 159 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 AIM2O14862 343 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 TSPAN3O60637 253 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 SMIM24O75264 130 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 CES1P23141 567 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 STC1P52823 247 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 TYSND1Q2T9J0 566 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 PPM1LQ5SGD2 360 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 ZNF549Q6P9A3 640 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 AFTPHQ6ULP2 937 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms