RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 C6orf10Q5SRN2 563 aa25.66■■□□□ 1.7
COL13A1-203ENST00000398969 TMEM207Q6UWW9 146 aa25.66■■□□□ 1.7
COL13A1-203ENST00000398969 CD300LGQ6UXG3 332 aa25.66■■□□□ 1.7
COL13A1-203ENST00000398969 GALNT7Q86SF2 657 aa25.66■■□□□ 1.7
COL13A1-203ENST00000398969 OR9I1Q8NGQ6 314 aa25.66■■□□□ 1.7
COL13A1-203ENST00000398969 TRMOQ9BU70 441 aa25.66■■□□□ 1.7
COL13A1-203ENST00000398969 TMEM181Q9P2C4 612 aa25.66■■□□□ 1.7
COL13A1-203ENST00000398969 CROTQ9UKG9 612 aa25.66■■□□□ 1.7
COL13A1-203ENST00000398969 DMTF1Q9Y222 760 aa25.66■■□□□ 1.7
COL13A1-203ENST00000398969 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.66■■□□□ 1.7
COL13A1-203ENST00000398969 CCDC160A6NGH7 325 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 ASGR1P07306 291 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 LAMB3Q13751 1172 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 LAYNQ6UX15 382 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 LARP4Q71RC2 724 aaKnown RBP eCLIP25.65■■□□□ 1.7
COL13A1-203ENST00000398969 HERC6Q8IVU3 1022 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 ALG9Q9H6U8 611 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 NT5MQ9NPB1 228 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 PTPRDP23468 1912 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 MIA3Q5JRA6 1907 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 TRPA1O75762 1119 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 SRP72O76094 671 aaKnown RBP25.65■■□□□ 1.7
COL13A1-203ENST00000398969 PAPSS2O95340 614 aaPredicted RBP25.65■■□□□ 1.7
COL13A1-203ENST00000398969 POMCP01189 267 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 CHRNA1P02708 482 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 SLC7A1P30825 629 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 CD86P42081 329 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 KCNC1P48547 511 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 CDKN2DP55273 166 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 MAXP61244 160 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 SAMD4BQ5PRF9 694 aaKnown RBP25.65■■□□□ 1.7
COL13A1-203ENST00000398969 CYP2R1Q6VVX0 501 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 HACD2Q6Y1H2 254 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 LDB1Q86U70 411 aaPredicted RBP25.65■■□□□ 1.7
COL13A1-203ENST00000398969 RIN3Q8TB24 985 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 L3HYPDHQ96EM0 354 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 HIC2Q96JB3 615 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 UHRF1Q96T88 793 aaPredicted RBP25.65■■□□□ 1.7
COL13A1-203ENST00000398969 NMUR1Q9HB89 426 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 RNF186Q9NXI6 227 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 RNF11Q9Y3C5 154 aa25.65■■□□□ 1.7
COL13A1-203ENST00000398969 WASH4PA8MWX3 477 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 TNFRSF10BO14763 440 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 MT-CO1P00395 513 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 ASLP04424 464 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 PRKAR2AP13861 404 aaKnown RBP25.64■■□□□ 1.7
COL13A1-203ENST00000398969 ELNP15502 786 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 TSPAN8P19075 237 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 NR1H2P55055 460 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 TXNL4AP83876 142 aaKnown RBP25.64■■□□□ 1.7
COL13A1-203ENST00000398969 NRG1Q02297 640 aaPredicted RBP25.64■■□□□ 1.7
COL13A1-203ENST00000398969 SP3Q02447 781 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 KCNA10Q16322 511 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 ZNF678Q5SXM1 525 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 GPR158Q5T848 1215 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 AMIGO2Q86SJ2 522 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 OCEL1Q9H607 264 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 SNX13Q9Y5W8 968 aa25.64■■□□□ 1.7
COL13A1-203ENST00000398969 NLRC5Q86WI3 1866 aa25.64■■□□□ 1.69
COL13A1-203ENST00000398969 ATP6AP2A0A1C7CYW4 349 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 SLC7A4O43246 635 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 ATP6AP2O75787 350 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 SUPT7LO94864 414 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 FGFR3P22607 806 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 MLLT6P55198 1093 aaPredicted RBP25.63■■□□□ 1.69
COL13A1-203ENST00000398969 MTX3Q5HYI7 312 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 OVOS1Q6IE37 1185 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 ARHGAP22Q7Z5H3 698 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 MRPL10Q7Z7H8 261 aaKnown RBP25.63■■□□□ 1.69
COL13A1-203ENST00000398969 ISCA2Q86U28 154 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 OSBPL11Q9BXB4 747 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 FBRSL1Q9HCM7 1045 aaKnown RBP25.63■■□□□ 1.69
COL13A1-203ENST00000398969 HACD3Q9P035 362 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 DSEQ9UL01 958 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 MTF2Q9Y483 593 aaPredicted RBP25.63■■□□□ 1.69
COL13A1-203ENST00000398969 CASP8AP2Q9UKL3 1982 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 A0A1B0GTW7 788 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 M0QZQ0 153 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 CCL22O00626 93 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 S1PR4O95977 384 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 PENKP01210 267 aaPredicted RBP25.63■■□□□ 1.69
COL13A1-203ENST00000398969 ACADVLP49748 655 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 ATP4BP51164 291 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 RENBPP51606 427 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 ITKQ08881 620 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 IHHQ14623 411 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 MAPRE1Q15691 268 aaKnown RBP25.63■■□□□ 1.69
COL13A1-203ENST00000398969 PIK3R6Q5UE93 754 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 KLHDC9Q8NEP7 349 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 MFSD1Q9H3U5 465 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 VPS45Q9NRW7 570 aa25.63■■□□□ 1.69
COL13A1-203ENST00000398969 ARHGEF37A1IGU5 675 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 MROH6A6NGR9 719 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 J3KR12 359 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 MMP2P08253 660 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 GRIK1P39086 918 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 ARSDP51689 593 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 SLC10A7Q0GE19 358 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 HMBOX1Q6NT76 420 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 BORAQ6PGQ7 559 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms