RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 CAPN15O75808 1086 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 BEST1O76090 585 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 FYNP06241 537 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 GPIP06744 558 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 FCGR1AP12314 374 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 CCNA2P20248 432 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 BTG3Q14201 252 aaPredicted RBP17.4■□□□□ 0.38
EWSR1-206ENST00000397938 TRPV3Q8NET8 790 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 OR13F1Q8NGS4 319 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 USP33Q8TEY7 942 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 TRUB1Q8WWH5 349 aaKnown RBP17.4■□□□□ 0.38
EWSR1-206ENST00000397938 ITPKCQ96DU7 683 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 PHF21BQ96EK2 531 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 C3orf30Q96M34 536 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 RNF19AQ9NV58 838 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 CMTM6Q9NX76 183 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 FBXW11Q9UKB1 542 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 FBXO5Q9UKT4 447 aa17.4■□□□□ 0.38
EWSR1-206ENST00000397938 AAR2Q9Y312 384 aaKnown RBP17.4■□□□□ 0.38
EWSR1-206ENST00000397938 J3QRK9 145 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 AURKAO14965 403 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 ARPC2O15144 300 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 ESRRBO95718 433 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 MYL3P08590 195 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 TXNP10599 105 aaKnown RBP17.39■□□□□ 0.37
EWSR1-206ENST00000397938 ZNF182P17025 639 aaPredicted RBP17.39■□□□□ 0.37
EWSR1-206ENST00000397938 HALP42357 657 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 NR1D2Q14995 579 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 KIF19Q2TAC6 998 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 DENND5AQ6IQ26 1287 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 GADL1Q6ZQY3 521 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 USP51Q70EK9 711 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 SLC22A9Q8IVM8 553 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 DDIASQ8IXT1 998 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 PNPT1Q8TCS8 783 aaKnown RBP17.39■□□□□ 0.37
EWSR1-206ENST00000397938 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.39■□□□□ 0.376e-6■■■□□ 18.3
EWSR1-206ENST00000397938 FBXL8Q96CD0 374 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 HNRNPABQ99729 332 aaKnown RBP17.39■□□□□ 0.37
EWSR1-206ENST00000397938 OLFM1Q99784 485 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 TRMOQ9BU70 441 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 PKD2L2Q9NZM6 624 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 TRIM43BA6NCK2 446 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 CLDN5O00501 218 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 RBP1P09455 135 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 LTA4HP09960 611 aaKnown RBP17.39■□□□□ 0.37
EWSR1-206ENST00000397938 GFAPP14136 432 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 NPR3P17342 541 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 CAPN3P20807 821 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 CDH3P22223 829 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 MAP4P27816 1152 aaKnown RBP17.39■□□□□ 0.37
EWSR1-206ENST00000397938 TMBIM6P55061 237 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 TRAF2Q12933 501 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 ZC3H7AQ8IWR0 971 aaKnown RBP17.39■□□□□ 0.37
EWSR1-206ENST00000397938 SLC15A4Q8N697 577 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 KCTD13Q8WZ19 329 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 ABHD8Q96I13 439 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 TDRD1Q9BXT4 1180 aaKnown RBP17.39■□□□□ 0.37
EWSR1-206ENST00000397938 ZNF232Q9UNY5 417 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 CORINQ9Y5Q5 1042 aa17.39■□□□□ 0.37
EWSR1-206ENST00000397938 DYTNA2CJ06 578 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 MT-CYBP00156 380 aaPredicted RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 MATN1P21941 496 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 RPS12P25398 132 aaKnown RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 RFC2P35250 354 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 RPS9P46781 194 aaKnown RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 YAP1P46937 504 aaKnown RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 CCNYL2Q5T2Q4 361 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 CCDC117Q8IWD4 279 aaPredicted RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 B3GALNT2Q8NCR0 500 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 IPMKQ8NFU5 416 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 PTCD2Q8WV60 388 aaKnown RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 TNIP3Q96KP6 325 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 TSGA13Q96PP4 275 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 PPP1R10Q96QC0 940 aaKnown RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 ARMC7Q9H6L4 198 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 TREX1Q9NSU2 369 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 TRNAU1APQ9NX07 287 aaKnown RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 GDAP2Q9NXN4 497 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 ERGIC3Q9Y282 383 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 B3GNT3Q9Y2A9 372 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 SNX10Q9Y5X0 201 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 PIRO00625 290 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 DYNC1LI2O43237 492 aaPredicted RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 PAMP19021 973 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 SLC6A2P23975 617 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 CAPRIN1Q14444 709 aaKnown RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 RGS21Q2M5E4 152 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 VPS26BQ4G0F5 336 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 KIAA0930Q6ICG6 404 aaPredicted RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 CHST15Q7LFX5 561 aaPredicted RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 APPL2Q8NEU8 664 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 CELF6Q96J87 481 aaKnown RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 FICDQ9BVA6 458 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 AKTIPQ9H8T0 292 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 SPON1Q9HCB6 807 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 GID8Q9NWU2 228 aa17.38■□□□□ 0.37
EWSR1-206ENST00000397938 IFT80Q9P2H3 777 aaPredicted RBP17.38■□□□□ 0.37
EWSR1-206ENST00000397938 CFAP99D6REC4 459 aa17.37■□□□□ 0.37
EWSR1-206ENST00000397938 ANGPT2O15123 496 aa17.37■□□□□ 0.37
EWSR1-206ENST00000397938 LGALS2P05162 132 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms