RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 STK19P49842 368 aaPredicted RBP13.34□□□□□ -0.27
SEC13-209ENST00000397117 ATXN3P54252 364 aaPredicted RBP13.34□□□□□ -0.27
SEC13-209ENST00000397117 WNT3AP56704 352 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 SKOR1P84550 965 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 ACCSLQ4AC99 568 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 HP1BP3Q5SSJ5 553 aaPredicted RBP13.34□□□□□ -0.27
SEC13-209ENST00000397117 TRMT11Q7Z4G4 463 aaKnown RBP13.34□□□□□ -0.27
SEC13-209ENST00000397117 RABEPKQ7Z6M1 372 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 RELL1Q8IUW5 271 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 SLC41A1Q8IVJ1 513 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 KLHDC8BQ8IXV7 354 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 MINDY1Q8N5J2 469 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 OR2I1PQ8NGU4 316 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 PYROXD1Q8WU10 500 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 IFT43Q96FT9 208 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 TTC25Q96NG3 672 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 NUDCD1Q96RS6 583 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 FICDQ9BVA6 458 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 FUT8Q9BYC5 575 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 PABPC3Q9H361 631 aaKnown RBP13.34□□□□□ -0.27
SEC13-209ENST00000397117 CDC42EP4Q9H3Q1 356 aaKnown RBP13.34□□□□□ -0.27
SEC13-209ENST00000397117 NOD2Q9HC29 1040 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 LHX3Q9UBR4 397 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 ACACAQ13085 2346 aa13.33□□□□□ -0.27
SEC13-209ENST00000397117 SDR42E2A6NKP2 422 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 E7ESA3 106 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 ALOX15BO15296 676 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 TIMM44O43615 452 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 GJB3O75712 270 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 IGSF6O95976 241 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 CPP00450 1065 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 AGTP01019 485 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 MMP2P08253 660 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 SRCP12931 536 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 HOXB2P14652 356 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 NTSR1P30989 418 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 HSD17B3P37058 310 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 SESN2P58004 480 aaPredicted RBP13.33□□□□□ -0.28
SEC13-209ENST00000397117 CDH17Q12864 832 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 OLIG2Q13516 323 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 ZNF423Q2M1K9 1284 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 MSS51Q4VC12 460 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 CCDC38Q502W7 563 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 RALGPS1Q5JS13 557 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 TMEM215Q68D42 235 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 DENND2CQ68D51 928 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 KDELC1Q6UW63 502 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 NUDT18Q6ZVK8 323 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 ZNF534Q76KX8 674 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 KDELC2Q7Z4H8 507 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 ANKMY2Q8IV38 441 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 PALM2Q8IXS6 379 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 SH2D3CQ8N5H7 860 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 TERB1Q8NA31 727 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 OR52K1Q8NGK4 314 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 ISG20Q96AZ6 181 aaKnown RBP13.33□□□□□ -0.28
SEC13-209ENST00000397117 LRRC39Q96DD0 335 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 MRGPRX2Q96LB1 330 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 APOL2Q9BQE5 337 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 CEP44Q9C0F1 390 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 PIH1D1Q9NWS0 290 aaKnown RBP13.33□□□□□ -0.28
SEC13-209ENST00000397117 BFARQ9NZS9 450 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 PLA2G4CQ9UP65 541 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 ERVW-1Q9UQF0 538 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 PTPRBP23467 1997 aa13.33□□□□□ -0.28
SEC13-209ENST00000397117 MAP2K7O14733 419 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 BANF1O75531 89 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 SRPRAP08240 638 aaKnown RBP13.32□□□□□ -0.28
SEC13-209ENST00000397117 DLDP09622 509 aaKnown RBP13.32□□□□□ -0.28
SEC13-209ENST00000397117 CR2P20023 1033 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 CA4P22748 312 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 ELK3P41970 407 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 WASP42768 502 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 MAGEA3P43357 314 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 RGRP47804 291 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 ST8SIA6P61647 398 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 AP1S1P61966 158 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 SNRPD1P62314 119 aaKnown RBP13.32□□□□□ -0.28
SEC13-209ENST00000397117 SLC14A1Q13336 389 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 EIF4HQ15056 248 aaKnown RBP13.32□□□□□ -0.28
SEC13-209ENST00000397117 SLC14A2Q15849 920 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 KYNUQ16719 465 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 CFAP58Q5T655 872 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 ATXN7L2Q5T6C5 722 aaPredicted RBP13.32□□□□□ -0.28
SEC13-209ENST00000397117 CASC4Q6P4E1 433 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 SRLQ86TD4 932 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 PROSER1Q86XN7 944 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 RYBPQ8N488 228 aaPredicted RBP13.32□□□□□ -0.28
SEC13-209ENST00000397117 FBXO36Q8NEA4 188 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 CYB5D2Q8WUJ1 264 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 TADA1Q96BN2 335 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 C9orf72Q96LT7 481 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 ACOX2Q99424 681 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 TM6SF2Q9BZW4 377 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 CASS4Q9NQ75 786 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 ELOVL2Q9NXB9 296 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 MAD1L1Q9Y6D9 718 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 KNL1Q8NG31 2342 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 IGSF10Q6WRI0 2623 aa13.32□□□□□ -0.28
SEC13-209ENST00000397117 RIPK2O43353 540 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms