RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 PRSS56P0CW18 603 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 RPL17P18621 184 aaKnown RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 FDXRP22570 491 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 KPNA1P52294 538 aaPredicted RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 C1QTNF8P60827 252 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 GNA12Q03113 381 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 KLC1Q07866 573 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 IRGCQ6NXR0 463 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 DHDDSQ86SQ9 333 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 CUZD1Q86UP6 607 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 FBXO22Q8NEZ5 403 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 MICAL1Q8TDZ2 1067 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 C2orf15Q8WU43 125 aaKnown RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 PRICKLE1Q96MT3 831 aaPredicted RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 ZNF599Q96NL3 588 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 ADAMTS6Q9UKP5 1117 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 UBFD1O14562 309 aaKnown RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 CD3EAPO15446 510 aaKnown RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 RPP40O75818 363 aaKnown RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 SNUPNO95149 360 aaKnown RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 GLP2RO95838 553 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 EPOP01588 193 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 DPP6P42658 865 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 RPS24P62847 133 aaKnown RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 ELAVL2Q12926 359 aaKnown RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 SETD3Q86TU7 594 aaPredicted RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 GPR150Q8NGU9 434 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 BRSK1Q8TDC3 778 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 MGME1Q9BQP7 344 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 HMX1Q9NP08 348 aaPredicted RBP16.6■□□□□ 0.25
TRIM39-205ENST00000396551 DNMT3LQ9UJW3 386 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 GBF1Q92538 1859 aa16.6■□□□□ 0.25
TRIM39-205ENST00000396551 H3BNX3 289 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 ATP5C1P36542 298 aaKnown RBP16.59■□□□□ 0.25
TRIM39-205ENST00000396551 SGSHP51688 502 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 CDC16Q13042 620 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 BTG3Q14201 252 aaPredicted RBP16.59■□□□□ 0.25
TRIM39-205ENST00000396551 C16orf89Q6UX73 402 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 HMGCLL1Q8TB92 370 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 TMEM175Q9BSA9 504 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 MAGEH1Q9H213 219 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 POLR3BQ9NW08 1133 aaPredicted RBP16.59■□□□□ 0.25
TRIM39-205ENST00000396551 PRPF19Q9UMS4 504 aaKnown RBP16.59■□□□□ 0.25
TRIM39-205ENST00000396551 TCAF2A6NFQ2 919 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 TRPA1O75762 1119 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 SERPINF2P08697 491 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 SATB1Q01826 763 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 KBTBD6Q86V97 674 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 CEP70Q8NHQ1 597 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 PEX13Q92968 403 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 ECSITQ9BQ95 431 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 SPO11Q9Y5K1 396 aa16.59■□□□□ 0.25
TRIM39-205ENST00000396551 CD1DP15813 335 aa16.58■□□□□ 0.25
TRIM39-205ENST00000396551 SLC26A3P40879 764 aa16.58■□□□□ 0.25
TRIM39-205ENST00000396551 THOP1P52888 689 aa16.58■□□□□ 0.25
TRIM39-205ENST00000396551 IL31Q6EBC2 164 aa16.58■□□□□ 0.25
TRIM39-205ENST00000396551 CHSY3Q70JA7 882 aa16.58■□□□□ 0.25
TRIM39-205ENST00000396551 SEPT8Q92599 483 aa16.58■□□□□ 0.25
TRIM39-205ENST00000396551 CDRT15Q96T59 188 aa16.58■□□□□ 0.25
TRIM39-205ENST00000396551 MEAF6Q9HAF1 191 aa16.58■□□□□ 0.25
TRIM39-205ENST00000396551 STK39Q9UEW8 545 aa16.58■□□□□ 0.25
TRIM39-205ENST00000396551 CORO1CQ9ULV4 474 aaPredicted RBP16.58■□□□□ 0.25
TRIM39-205ENST00000396551 UPP2O95045 317 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 NDST3O95803 873 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 KLKB1P03952 638 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 TSPAN8P19075 237 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 IMPDH1P20839 514 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 MRPS35P82673 323 aaKnown RBP16.58■□□□□ 0.24
TRIM39-205ENST00000396551 BFSP2Q13515 415 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 DENND1CQ8IV53 801 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 SLC22A9Q8IVM8 553 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 SMIM14Q96QK8 99 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 CDH4P55283 916 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 DSG1Q02413 1049 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 PPP1R3AQ16821 1122 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 ZNF423Q2M1K9 1284 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 PIGGQ5H8A4 983 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 ZNF678Q5SXM1 525 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 CYHR1Q6ZMK1 362 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 GK5Q6ZS86 529 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 OR4L1Q8NH43 312 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 L3HYPDHQ96EM0 354 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 EXOC2Q96KP1 924 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 SPON2Q9BUD6 331 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 VN1R3Q9BXE9 311 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 EML4Q9HC35 981 aaKnown RBP16.58■□□□□ 0.24
TRIM39-205ENST00000396551 CATSPERZQ9NTU4 200 aa16.58■□□□□ 0.24
TRIM39-205ENST00000396551 CCDC189A1A4V9 331 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 COCHO43405 550 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 ENO3P13929 434 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 RAG1P15918 1043 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 SUOXP51687 545 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 GALNT1Q10472 559 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 MTA1Q13330 715 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 UNC50Q53HI1 259 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 LPCAT4Q643R3 524 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 SLC8B1Q6J4K2 584 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 BNC2Q6ZN30 1099 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 PGAM4Q8N0Y7 254 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 WBP2Q969T9 261 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms