RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TMEM9BQ9NQ34 198 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 MBNL1Q9NR56 388 aaKnown RBP16.61■□□□□ 0.25
CXCL1-201ENST00000395761 TRHDEQ9UKU6 1024 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 HS3ST3A1Q9Y663 406 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 A0A0J9YYE9 177 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 CFAP69A5D8W1 941 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 HEXIM1O94992 359 aaKnown RBP16.6■□□□□ 0.25
CXCL1-201ENST00000395761 TRBC1P01850 177 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 FGGP02679 453 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 CYP2A6P11509 494 aaPredicted RBP16.6■□□□□ 0.25
CXCL1-201ENST00000395761 CA4P22748 312 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 ATXN3P54252 364 aaPredicted RBP16.6■□□□□ 0.25
CXCL1-201ENST00000395761 EPHB1P54762 984 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 RPL26P61254 145 aaKnown RBP16.6■□□□□ 0.25
CXCL1-201ENST00000395761 TUBB2AQ13885 445 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 GALNT3Q14435 633 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 SLC14A2Q15849 920 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 CNGA3Q16281 694 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 QPCTQ16769 361 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 RSPO4Q2I0M5 234 aaPredicted RBP16.6■□□□□ 0.25
CXCL1-201ENST00000395761 KDELC1Q6UW63 502 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 ABI3BPQ7Z7G0 1075 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 SPATS2Q86XZ4 545 aaKnown RBP16.6■□□□□ 0.25
CXCL1-201ENST00000395761 CBARPQ8N350 705 aaPredicted RBP16.6■□□□□ 0.25
CXCL1-201ENST00000395761 MINDY1Q8N5J2 469 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 TP53I13Q8NBR0 393 aaPredicted RBP16.6■□□□□ 0.25
CXCL1-201ENST00000395761 NETO1Q8TDF5 533 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 KLHDC7BQ96G42 594 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 GORASP1Q9BQQ3 440 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 TMEM121Q9BTD3 319 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 TUBB2BQ9BVA1 445 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 ZDHHC5Q9C0B5 715 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 GAREM1Q9H706 876 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 RNF14Q9UBS8 474 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 RSPH14Q9UHP6 348 aa16.6■□□□□ 0.25
CXCL1-201ENST00000395761 RPL26L1Q9UNX3 145 aaKnown RBP16.6■□□□□ 0.25
CXCL1-201ENST00000395761 CACNA1EQ15878 2313 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 CFAP54Q96N23 3096 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 ANKRD66B4E2M5 251 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 FPGTO14772 594 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 LIASO43766 372 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 RECQL5O94762 991 aaPredicted RBP16.59■□□□□ 0.25
CXCL1-201ENST00000395761 ELFN1P0C7U0 828 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 THEGLP0DJG4 465 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 GDF10P55107 478 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 WNT3AP56704 352 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 NXPH1P58417 271 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 CDK18Q07002 472 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 SNX1Q13596 522 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 ACOX1Q15067 660 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 IRF4Q15306 451 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 WSCD2Q2TBF2 565 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 UAP1L1Q3KQV9 507 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 DENND2CQ68D51 928 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 CRTC1Q6UUV9 634 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 Q6ZSR6 202 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 USP45Q70EL2 814 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 HSD11B1LQ7Z5J1 315 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 NDUFAF2Q8N183 169 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 DENND6BQ8NEG7 585 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 OR13H1Q8NG92 308 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 ACTRT1Q8TDG2 376 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 COG1Q8WTW3 980 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 SKA1Q96BD8 255 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 RMDN1Q96DB5 314 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 MS4A14Q96JA4 679 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 MRGPRX2Q96LB1 330 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 COQ10AQ96MF6 247 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 SPATA13Q96N96 652 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 FERMT1Q9BQL6 677 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 GBA3Q9H227 469 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 FAM153AQ9UHL3 310 aa16.59■□□□□ 0.25
CXCL1-201ENST00000395761 FNDC3AQ9Y2H6 1198 aaKnown RBP16.59■□□□□ 0.25
CXCL1-201ENST00000395761 KNL1Q8NG31 2342 aa16.58■□□□□ 0.25
CXCL1-201ENST00000395761 C5orf60A6NFR6 353 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 STK10O94804 968 aaKnown RBP16.58■□□□□ 0.24
CXCL1-201ENST00000395761 NFKBIAP25963 317 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 PSMB4P28070 264 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 IGFALSP35858 605 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 LIMK1P53667 647 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 PTSQ03393 145 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 OVGP1Q12889 678 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 LRRC14Q15048 493 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 AGERQ15109 404 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 OASLQ15646 514 aaKnown RBP16.58■□□□□ 0.24
CXCL1-201ENST00000395761 LONRF2Q1L5Z9 754 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 TPRG1LQ5T0D9 272 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 LRRC66Q68CR7 880 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 ITPRIPL1Q6GPH6 555 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 IL27RAQ6UWB1 636 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 RFLNAQ6ZTI6 216 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 PTAR1Q7Z6K3 402 aaPredicted RBP16.58■□□□□ 0.24
CXCL1-201ENST00000395761 IQCHQ86VS3 1027 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 CREG2Q8IUH2 290 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 SLC22A18ASQ8N1D0 253 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 ZNF592Q92610 1267 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 IFT43Q96FT9 208 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 MLPHQ9BV36 600 aaPredicted RBP16.58■□□□□ 0.24
CXCL1-201ENST00000395761 ADGRE3Q9BY15 652 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 FRMD8P1Q9BZ68 369 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms