RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 HDDC3Q8N4P3 179 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 PCDH20Q8N6Y1 951 aaKnown RBP8.53□□□□□ -1.04
HERC4-203ENST00000395185 FRMD1Q8N878 549 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 ZNF366Q8N895 744 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 NETO1Q8TDF5 533 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 SKA1Q96BD8 255 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 LRRC39Q96DD0 335 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 FEM1CQ96JP0 617 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 CPEB1Q9BZB8 566 aaKnown RBP8.53□□□□□ -1.04
HERC4-203ENST00000395185 PABPC3Q9H361 631 aaKnown RBP8.53□□□□□ -1.04
HERC4-203ENST00000395185 LRRC40Q9H9A6 602 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 CD248Q9HCU0 757 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 ARFGAP3Q9NP61 516 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 ZNF446Q9NWS9 450 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 FBXL12Q9NXK8 326 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 MTRF1LQ9UGC7 380 aaKnown RBP8.53□□□□□ -1.04
HERC4-203ENST00000395185 SLC6A14Q9UN76 642 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 PPIL1Q9Y3C6 166 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 TEX264Q9Y6I9 313 aa8.53□□□□□ -1.04
HERC4-203ENST00000395185 NYNRINQ9P2P1 1898 aaKnown RBP8.53□□□□□ -1.04
HERC4-203ENST00000395185 TTC24A2A3L6 582 aaPredicted RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 SDR42E2A6NKP2 422 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 METTL12A8MUP2 240 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 AP3B1O00203 1094 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 ATP8B1O43520 1251 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 BNIP3LO60238 219 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 AVILO75366 819 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 ERLIN1O75477 346 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 GJB3O75712 270 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 RNASEH2AO75792 299 aaKnown RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 SEMA4FO95754 770 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 TTC4O95801 387 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 AGTP01019 485 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 C1QAP02745 245 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 PRNPP04156 253 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 CFIP05156 583 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 TGM1P22735 817 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 PTGER3P43115 390 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 MAGEA4P43358 317 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 MAPK8P45983 427 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 NPY2RP49146 381 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 STK19P49842 368 aaPredicted RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 ARL4CP56559 192 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 RPL26P61254 145 aaKnown RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 AP1S1P61966 158 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 SARNPP82979 210 aaKnown RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 DHX9Q08211 1270 aaKnown RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 FRG1Q14331 258 aaKnown RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 ZNF235Q14590 738 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 TEAD4Q15561 434 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 CCDC6Q16204 474 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 HIF1AQ16665 826 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 RSPO4Q2I0M5 234 aaPredicted RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 MYLK3Q32MK0 819 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 TRIM61Q5EBN2 209 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 PLA2G2CQ5R387 149 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 NAPEPLDQ6IQ20 393 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 TRMT10CQ7L0Y3 403 aaKnown RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 PDIK1LQ8N165 341 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 RYBPQ8N488 228 aaPredicted RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 TAB3Q8N5C8 712 aaPredicted RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 OR2AP1Q8NGE2 309 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 OR2A12Q8NGT7 310 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 PTPRN2Q92932 1015 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 ECHDC3Q96DC8 303 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 HSPA12BQ96MM6 686 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 RBM15Q96T37 977 aaKnown RBP eCLIP8.52□□□□□ -1.053e-7■■□□□ 13.6
HERC4-203ENST00000395185 RTKNQ9BST9 563 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 CINPQ9BW66 212 aaPredicted RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 MIR1-1HGQ9H1L0 117 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 KDM4CQ9H3R0 1056 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 HAUS2Q9NVX0 235 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 PLA2G2EQ9NZK7 142 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 EVLQ9UI08 416 aaPredicted RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 PILRBQ9UKJ0 227 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 FZD4Q9ULV1 537 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 RPL26L1Q9UNX3 145 aaKnown RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 FCF1Q9Y324 198 aaKnown RBP8.52□□□□□ -1.05
HERC4-203ENST00000395185 NFS1Q9Y697 457 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 CACNA1IQ9P0X4 2223 aa8.52□□□□□ -1.05
HERC4-203ENST00000395185 KMT2EQ8IZD2 1858 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 TBC1D3DA0A087WVF3 549 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 TBC1D3IA0A087WXS9 549 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 TBC1D3EA0A087X179 549 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 TBC1D3KA0A087X1G2 549 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 A0A1B0GTW7 788 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 TSPAN11A1L157 253 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 MAGEB16A2A368 324 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 GOLGA6CA6NDK9 693 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 GOLGA6BA6NDN3 693 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 TBC1D3FA6NER0 549 aaPredicted RBP8.51□□□□□ -1.05
HERC4-203ENST00000395185 FAM47DPA6NHR8 397 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 TBC1D3LB9A6J9 549 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 E7EVH7 732 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 MID1O15344 667 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 BCAT2O15382 392 aaPredicted RBP8.51□□□□□ -1.05
HERC4-203ENST00000395185 SLC7A4O43246 635 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 SOCS5O75159 536 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 TCEA3O75764 348 aa8.51□□□□□ -1.05
HERC4-203ENST00000395185 POP4O95707 220 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms