RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 APOA1P02647 267 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 LTFP02788 710 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 CALB1P05937 261 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 GRIK1P39086 918 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 CDKN2BP42772 138 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 SLC12A2P55011 1212 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 ORC2Q13416 577 aaPredicted RBP12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 GALNT3Q14435 633 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 FAM209BQ5JX69 171 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 EFL1Q7Z2Z2 1120 aaKnown RBP12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 TLK2Q86UE8 772 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 HORMAD1Q86X24 394 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 PLD3Q8IV08 490 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 WDR49Q8IV35 697 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 SVOPQ8N4V2 548 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 PNPT1Q8TCS8 783 aaKnown RBP12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 HDHD5Q9BXW7 423 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 SNX15Q9NRS6 342 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 MAGED2Q9UNF1 606 aaPredicted RBP12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 PCDHB12Q9Y5F1 795 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 LAMB1P07942 1786 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 SMLR1H3BR10 107 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 RASAL1O95294 804 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 APRTP07741 180 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 IL7P13232 177 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 CRADDP78560 199 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 ZNF181Q2M3W8 571 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 HABP4Q5JVS0 413 aaKnown RBP12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 ODR4Q5SWX8 454 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 CFAP77Q6ZQR2 320 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 VANGL1Q8TAA9 524 aaPredicted RBP12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 LRCH3Q96II8 777 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 BTN2A3PQ96KV6 586 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 SMOC2Q9H3U7 446 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 AGPAT4Q9NRZ5 378 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 IP6K2Q9UHH9 426 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 FBXO5Q9UKT4 447 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 NOSIPQ9Y314 301 aaKnown RBP12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 PCDHB3Q9Y5E6 796 aa12.57□□□□□ -0.4
SLC28A1-203ENST00000394573 RGS5O15539 181 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 CHMP2AO43633 222 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 GLRA3O75311 464 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 DNTTP04053 509 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 GGT5P36269 586 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 DDOSTP39656 456 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 LIG4P49917 911 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 PGGT1BP53609 377 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 BTN1A1Q13410 526 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 PCBP1Q15365 356 aaKnown RBP eCLIP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 SEL1L3Q68CR1 1132 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 PLD6Q8N2A8 252 aaKnown RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 PIK3C3Q8NEB9 887 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 MUL1Q969V5 352 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 SIPA1Q96FS4 1042 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 TEX13BQ9BXU2 312 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 RHOBTB2Q9BYZ6 727 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 TRIM15Q9C019 465 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 UNC93B1Q9H1C4 597 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 MRPL40Q9NQ50 206 aaKnown RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 DMAC2Q9NW81 257 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 MTMR4Q9NYA4 1195 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 AASSQ9UDR5 926 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 DPP7Q9UHL4 492 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 SNX5Q9Y5X3 404 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 POLRMTO00411 1230 aaKnown RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 TRIM24O15164 1050 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 NDUFA2O43678 99 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 RNGTTO60942 597 aaKnown RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 MT-CO1P00395 513 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 MTHFD1P11586 935 aaKnown RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 IMPDH1P20839 514 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 PSMB9P28065 219 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 MPP1Q00013 466 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 BTBD16Q32M84 506 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 CYP27C1Q4G0S4 372 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 TRMT1LQ7Z2T5 733 aaKnown RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 IFNEQ86WN2 208 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 PIAS4Q8N2W9 510 aaPredicted RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 PACRGLQ8N7B6 248 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 MCEEQ96PE7 176 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 LPIN3Q9BQK8 851 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 WACQ9BTA9 647 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 PLA2G12BQ9BX93 195 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 ASPSCR1Q9BZE9 553 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 DDX4Q9NQI0 724 aaKnown RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 PAK1IP1Q9NWT1 392 aaPredicted RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 TMCC3Q9ULS5 477 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 PSAT1Q9Y617 370 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 MROH5Q6ZUA9 1318 aa12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
SLC28A1-203ENST00000394573 DLEC1Q9Y238 1755 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 SLC12A8A0AV02 714 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 XPNPEP2O43895 674 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 FCER2P06734 321 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 TALDO1P37837 337 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 IL12RB1P42701 662 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 NUMBP49757 651 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms