RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ARVCFO00192 962 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 MUSKO15146 869 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 CHRM3P20309 590 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 HOXC13P31276 330 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 HADHAP40939 763 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 PRKAA2P54646 552 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 FAM189BP81408 668 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 FASTKQ14296 549 aaKnown RBP13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 FAM171A1Q5VUB5 890 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 MIB1Q86YT6 1006 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 ABI1Q8IZP0 508 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 CEP70Q8NHQ1 597 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 NAT14Q8WUY8 206 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 SLCO4A1Q96BD0 722 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 TBATAQ96M53 351 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 HAPLN3Q96S86 360 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 UBE2OQ9C0C9 1292 aaKnown RBP13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 FAM192AQ9GZU8 254 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 VCX3BQ9H321 246 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 SMOC2Q9H3U7 446 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 ENTPD7Q9NQZ7 604 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 CACNA2D2Q9NY47 1150 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 C6orf203Q9P0P8 240 aaPredicted RBP13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 LZTS1Q9Y250 596 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 ARL5AQ9Y689 179 aa13.53□□□□□ -0.24
GTF2F1-201ENST00000394456 A0A0U1RQS6 177 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 NPHS1O60500 1241 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 IPO13O94829 963 aaKnown RBP13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 SUPT7LO94864 414 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 OAZ2O95190 189 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 ALDOCP09972 364 aaKnown RBP13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 COL6A2P12110 1019 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 UGT1A6P19224 532 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 AFMIDQ63HM1 303 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 PIWIL4Q7Z3Z4 852 aaKnown RBP13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 SCML4Q8N228 414 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 PXYLP1Q8TE99 480 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 LPGAT1Q92604 370 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 ZNF512Q96ME7 567 aaPredicted RBP13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 SLC29A1Q99808 456 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 SH3GL3Q99963 347 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 GPR62Q9BZJ7 368 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 CATSPERBQ9H7T0 1116 aa13.52□□□□□ -0.24
GTF2F1-201ENST00000394456 PSMD12O00232 456 aaPredicted RBP13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 PLOD2O00469 737 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 UBDO15205 165 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 ACVRL1P37023 503 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 ECT2LQ008S8 904 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 TIAL1Q01085 375 aaKnown RBP eCLIP13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 POU4F1Q01851 419 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 EFEMP1Q12805 493 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 LRP8Q14114 963 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 GALNT3Q14435 633 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 GPNMBQ14956 572 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 PTPRRQ15256 657 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 CTXN3Q4LDR2 81 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 SIRPB2Q5JXA9 342 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 ZNF549Q6P9A3 640 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 RETREG3Q86VR2 466 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 APLFQ8IW19 511 aaPredicted RBP13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 MFN1Q8IWA4 741 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 SLC43A3Q8NBI5 491 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 PRPF18Q99633 342 aaKnown RBP13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 CENPKQ9BS16 269 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 GMIPQ9P107 970 aa13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 UXTQ9UBK9 157 aaPredicted RBP13.52□□□□□ -0.25
GTF2F1-201ENST00000394456 PSMD3O43242 534 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 SNUPNO95149 360 aaKnown RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 S1PR4O95977 384 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 LTA4HP09960 611 aaKnown RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 PIM1P11309 404 aaPredicted RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 SELPP16109 830 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 SERPINH1P50454 418 aaKnown RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 MLLT6P55198 1093 aaPredicted RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 TCTN1Q2MV58 587 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 MGAT5BQ3V5L5 792 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 NADK2Q4G0N4 442 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 RAP1GAP2Q684P5 730 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 RBM44Q6ZP01 1051 aaKnown RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 CILP2Q8IUL8 1156 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 FUNDC1Q8IVP5 155 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 DCP1BQ8IZD4 617 aaKnown RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 OR13C4Q8NGS5 318 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 IMP4Q96G21 291 aaKnown RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 NSMCE3Q96MG7 304 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 TSEN34Q9BSV6 310 aaKnown RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 COQ10BQ9H8M1 238 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 TMEM161AQ9NX61 479 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 SLC27A5Q9Y2P5 690 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 A0A087X1B8 175 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 H3BMM5 538 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 VILLO15195 856 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 PABPC4LP0CB38 370 aaKnown RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 FAM83EQ2M2I3 478 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 UNC50Q53HI1 259 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 MTX3Q5HYI7 312 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 RARS2Q5T160 578 aaKnown RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 CHSY3Q70JA7 882 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 ISCA2Q86U28 154 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms