RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 MTF2Q9Y483 593 aaPredicted RBP15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 V9GYQ6 96 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 TCRBV5S2A0A599 114 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 HOXC11O43248 304 aaPredicted RBP15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 SPNP16150 400 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 KCNA2P16389 499 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 KCNA5P22460 613 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 CATSPER4Q7RTX7 472 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 CEP97Q8IW35 865 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 KIAA2013Q8IYS2 634 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 CCDC185Q8N715 623 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 RDM1Q8NG50 284 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 MUL1Q969V5 352 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 HEXIM2Q96MH2 286 aaKnown RBP15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 TBCBQ99426 244 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 SLC30A3Q99726 388 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 POMKQ9H5K3 350 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 DKK3Q9UBP4 350 aa15.72■□□□□ 0.11
CSNK1A1-202ENST00000377843 DPYSL4O14531 572 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 CILPO75339 1184 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 GABBR2O75899 941 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 ALDOCP09972 364 aaKnown RBP15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 TCF3P15923 654 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 SDC4P31431 198 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 ACTR2P61160 394 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 LSM3P62310 102 aaKnown RBP15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 ECT2LQ008S8 904 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 DGKZQ13574 1117 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 CAPSQ13938 189 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 ADPRMQ3LIE5 342 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 UGT3A2Q3SY77 523 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 ZC3HC1Q86WB0 502 aaKnown RBP15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 SCUBE3Q8IX30 993 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 SLC16A10Q8TF71 515 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 B3GNT5Q9BYG0 378 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 ING2Q9H160 280 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 EPS8L2Q9H6S3 715 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 NEK6Q9HC98 313 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 SPON1Q9HCB6 807 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 CYP4F12Q9HCS2 524 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 ACTR3BQ9P1U1 418 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 ZNF639Q9UID6 485 aa15.71■□□□□ 0.11
CSNK1A1-202ENST00000377843 NPHS1O60500 1241 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 PLA2G6O60733 806 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 RGS20O76081 388 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 CD40LGP29965 261 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 APLP1P51693 650 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 CXCL9Q07325 125 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 VPS26BQ4G0F5 336 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 ZNF280DQ6N043 979 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 TAS2R42Q7RTR8 314 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 CDR2LQ86X02 465 aaPredicted RBP15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 OR6Q1Q8NGQ2 317 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 S100ZQ8WXG8 99 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 APOL2Q9BQE5 337 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 EMILIN2Q9BXX0 1053 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 CPSF3Q9UKF6 684 aaKnown RBP15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 VANGL2Q9ULK5 521 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 USP22Q9UPT9 525 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 USP3Q9Y6I4 520 aa15.71■□□□□ 0.1
CSNK1A1-202ENST00000377843 NR5A2O00482 541 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 NADKO95544 446 aaPredicted RBP15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 ALBP02768 609 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 PSAPP07602 524 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 HSD17B1P14061 328 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 CAPN3P20807 821 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 BDNFP23560 247 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 SERPINB1P30740 379 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 COPZ1P61923 177 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 GHRHRQ02643 423 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 GRM1Q13255 1194 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 SKIV2LQ15477 1246 aaKnown RBP15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 DALRD3Q5D0E6 543 aaKnown RBP15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 LAIR2Q6ISS4 152 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 C12orf29Q8N999 325 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 C3orf30Q96M34 536 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 MARCH7Q9H992 704 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 FBXO8Q9NRD0 319 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 GMIPQ9P107 970 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 GIMAP2Q9UG22 337 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 BAG5Q9UL15 447 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 H0YAE9 185 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 TPH1P17752 444 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 GPX3P22352 226 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 SLC6A2P23975 617 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 SLC12A1Q13621 1099 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 MEP1AQ16819 746 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 CCDC58Q4VC31 144 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 ZNF667Q5HYK9 610 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 ARHGEF16Q5VV41 709 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 CLEC6AQ6EIG7 209 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 TMEM192Q8IY95 271 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 MAGED4Q96JG8 741 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 TRIM15Q9C019 465 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 INTS10Q9NVR2 710 aaKnown RBP15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 ANKRD6Q9Y2G4 727 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 GPSM3Q9Y4H4 160 aa15.7■□□□□ 0.1
CSNK1A1-202ENST00000377843 KCNK1O00180 336 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 NFKBIEO00221 500 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms