RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CPOXP36551 454 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 CPA2P48052 419 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 NAA20P61599 178 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 CSHL1Q14406 222 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 NAA25Q14CX7 972 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 RALGPS1Q5JS13 557 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 RFWD3Q6PCD5 774 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 PTAR1Q7Z6K3 402 aaPredicted RBP14.06□□□□□ -0.16
USF1-202ENST00000368020 MFN1Q8IWA4 741 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 CPSF7Q8N684 471 aaKnown RBP14.06□□□□□ -0.16
USF1-202ENST00000368020 JADE3Q92613 823 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 SAMD11Q96NU1 681 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 ASB2Q96Q27 587 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 TCF12Q99081 682 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 RTKNQ9BST9 563 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 VN1R3Q9BXE9 311 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 POMKQ9H5K3 350 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 TBC1D30Q9Y2I9 924 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 ANAPC1Q9H1A4 1944 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 LCHNA4D1U4 455 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 CD3EAPO15446 510 aaKnown RBP14.05□□□□□ -0.16
USF1-202ENST00000368020 INSIG1O15503 277 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 FKBP6O75344 327 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 STC2O76061 302 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 FGF18O76093 207 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 CORO1AP31146 461 aaKnown RBP14.05□□□□□ -0.16
USF1-202ENST00000368020 SLC6A4P31645 630 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 GMPRP36959 345 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 PPARGP37231 505 aaPredicted RBP14.05□□□□□ -0.16
USF1-202ENST00000368020 ACTR3P61158 418 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 NFKB2Q00653 900 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 DSG1Q02413 1049 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 CREMQ03060 361 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 HERC3Q15034 1050 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 KHDC1Q4VXA5 237 aaKnown RBP14.05□□□□□ -0.16
USF1-202ENST00000368020 ACSBG2Q5FVE4 666 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 TRIM67Q6ZTA4 783 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 DENND1CQ8IV53 801 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 BLOC1S5Q8TDH9 187 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 ACTRT2Q8TDY3 377 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 TRIB3Q96RU7 358 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 THTPAQ9BU02 230 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 HERC2P3Q9BVR0 1158 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 ADGRE3Q9BY15 652 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 CATSPERZQ9NTU4 200 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 STOML2Q9UJZ1 356 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 GBF1Q92538 1859 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 PLXNA4Q9HCM2 1894 aa14.05□□□□□ -0.16
USF1-202ENST00000368020 C2orf81A6NN90 581 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 H3BNC9 293 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 DCXO43602 365 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 CHRNGP07510 517 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 F7P08709 466 aaPredicted RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 CCDC166P0CW27 439 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 COX4I1P13073 169 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 HMGA1P17096 107 aaKnown RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 MPSTP25325 297 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 PSMA3P25788 255 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 VHLP40337 213 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 SUOXP51687 545 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 AP2B1P63010 937 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 UBE3AQ05086 875 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 SLC34A1Q06495 639 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 DLG1Q12959 904 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 KLF10Q13118 480 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 PLD1Q13393 1074 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 ZNF460Q14592 562 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 RCN1Q15293 331 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 TAF1AQ15573 450 aaPredicted RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 TYSND1Q2T9J0 566 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 SLC9B1Q4ZJI4 515 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 RBM20Q5T481 1227 aaKnown RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 C1orf146Q5VVC0 180 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 FAM109BQ6ICB4 259 aaPredicted RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 AAGABQ6PD74 315 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 AFTPHQ6ULP2 937 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 ATG14Q6ZNE5 492 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 OR4L1Q8NH43 312 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 RP9Q8TA86 221 aaKnown RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 USP13Q92995 863 aaPredicted RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 SCUBE2Q9NQ36 999 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 BATF3Q9NR55 127 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 NLE1Q9NVX2 485 aaPredicted RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 NKX1-2Q9UD57 310 aaPredicted RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 SSX2IPQ9Y2D8 614 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 LRRC42Q9Y546 428 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 YIPF1Q9Y548 306 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 MYO9BQ13459 2157 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 RANBP2P49792 3224 aaKnown RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 A0A0D9SEW6 157 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 RGSL1A5PLK6 1076 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 GRXCR1A8MXD5 290 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 E9PBE3 544 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 CCNT2O60583 730 aaKnown RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 KLHL41O60662 606 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 SMIM24O75264 130 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 WISP3O95389 354 aaPredicted RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 FDXRP22570 491 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 PMLP29590 882 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 ELF1P32519 619 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms