RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 RILPQ96NA2 401 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 MFSD1Q9H3U5 465 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 KCNK13Q9HB14 408 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 GKN1Q9NS71 199 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.93□□□□□ -0.669e-6■□□□□ 10.4
H3F3A-202ENST00000366814 CHD5Q8TDI0 1954 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 E2F8A0AVK6 867 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 C2orf78A6NCI8 922 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 MROH6A6NGR9 719 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 C2CD4DB7Z1M9 353 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 H0Y626 953 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 TSPAN3O60637 253 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 TRIM13O60858 407 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 CRTAMO95727 393 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 LRG1P02750 347 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 KLKB1P03952 638 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 KITP10721 976 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 TARSP26639 723 aaKnown RBP10.93□□□□□ -0.66
H3F3A-202ENST00000366814 ARNTP27540 789 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 SERPINB3P29508 390 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 LEPRP48357 1165 aaKnown RBP10.93□□□□□ -0.66
H3F3A-202ENST00000366814 AQP5P55064 265 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 ABCE1P61221 599 aaKnown RBP10.93□□□□□ -0.66
H3F3A-202ENST00000366814 IRF9Q00978 393 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 ITGA9Q13797 1035 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 DLG2Q15700 870 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 TBCCQ15814 346 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 PPM1LQ5SGD2 360 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 KLC3Q6P597 504 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 ASRGL1Q7L266 308 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 PACS2Q86VP3 889 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 TDRD5Q8NAT2 981 aaKnown RBP10.93□□□□□ -0.66
H3F3A-202ENST00000366814 BRSK1Q8TDC3 778 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 BLOC1S5Q8TDH9 187 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 MRPS31Q92665 395 aaKnown RBP10.93□□□□□ -0.66
H3F3A-202ENST00000366814 GCNAQ96QF7 691 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 RNF38Q9H0F5 515 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 LRMDAQ9H2I8 198 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 ARHGEF3Q9NR81 526 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 ZDHHC7Q9NXF8 308 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 STOML2Q9UJZ1 356 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 RIMKLBQ9ULI2 386 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 RUVBL2Q9Y230 463 aaKnown RBP10.93□□□□□ -0.66
H3F3A-202ENST00000366814 DNAJC16Q9Y2G8 782 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 ZNF510Q9Y2H8 683 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 TBC1D30Q9Y2I9 924 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 MUC3AQ02505 3323 aa10.93□□□□□ -0.66
H3F3A-202ENST00000366814 CBX4O00257 560 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 INSIG1O15503 277 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 PHGDHO43175 533 aaKnown RBP10.92□□□□□ -0.66
H3F3A-202ENST00000366814 GPR37L1O60883 481 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 HSPA4LO95757 839 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 GSRP00390 522 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 ATXN1LP0C7T5 689 aaKnown RBP10.92□□□□□ -0.66
H3F3A-202ENST00000366814 COL9A1P20849 921 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 ELF3P78545 371 aaPredicted RBP10.92□□□□□ -0.66
H3F3A-202ENST00000366814 SNCBQ16143 134 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 CFAP157Q5JU67 520 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 RNF219Q5W0B1 726 aaPredicted RBP10.92□□□□□ -0.66
H3F3A-202ENST00000366814 FAM91A1Q658Y4 838 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 MRNIPQ6NTE8 343 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 PLD6Q8N2A8 252 aaKnown RBP10.92□□□□□ -0.66
H3F3A-202ENST00000366814 NUDCD1Q96RS6 583 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 LRFN3Q9BTN0 628 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 ACE2Q9BYF1 805 aaPredicted RBP10.92□□□□□ -0.66
H3F3A-202ENST00000366814 ZNF358Q9NW07 568 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 SMPD4Q9NXE4 827 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 MARCOQ9UEW3 520 aaPredicted RBP10.92□□□□□ -0.66
H3F3A-202ENST00000366814 LIMD1Q9UGP4 676 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 LNPEPQ9UIQ6 1025 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 HAO1Q9UJM8 370 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 CORO1CQ9ULV4 474 aaPredicted RBP10.92□□□□□ -0.66
H3F3A-202ENST00000366814 SORCS3Q9UPU3 1222 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 ANAPC1Q9H1A4 1944 aa10.92□□□□□ -0.66
H3F3A-202ENST00000366814 FCHO1O14526 889 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 KLHL2O95198 593 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 F11P03951 625 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 PRKCGP05129 697 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 C8AP07357 584 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 SLC35E2BP0CK96 405 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 HDCP19113 662 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 CALB2P22676 271 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 GABRB3P28472 473 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 PTPN4P29074 926 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 AVPR1AP37288 418 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 CSRP3P50461 194 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 SCNN1BP51168 640 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 HK2P52789 917 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 NSUN2Q08J23 767 aaKnown RBP eCLIP10.91□□□□□ -0.66
H3F3A-202ENST00000366814 KRT72Q14CN4 511 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 FAM83EQ2M2I3 478 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 LIPMQ5VYY2 423 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 LRRC8EQ6NSJ5 796 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 ZYG11AQ6WRX3 759 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 PTAR1Q7Z6K3 402 aaPredicted RBP10.91□□□□□ -0.66
H3F3A-202ENST00000366814 SDCCAG8Q86SQ7 713 aaPredicted RBP10.91□□□□□ -0.66
H3F3A-202ENST00000366814 CILP2Q8IUL8 1156 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 OR13J1Q8NGT2 312 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 STYXQ8WUJ0 223 aa10.91□□□□□ -0.66
H3F3A-202ENST00000366814 EDAQ92838 391 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms