RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 NAE1Q13564 534 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 EIF4A2Q14240 407 aaKnown RBP4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 HYIQ5T013 277 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 C4orf50Q6ZRC1 276 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 IKBIPQ70UQ0 350 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 LINGO2Q7L985 606 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 GSTA5Q7RTV2 222 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 FRMD1Q8N878 549 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 SCCPDHQ8NBX0 429 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 AGBL3Q8NEM8 1001 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 USP6NLQ92738 828 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 ARHGEF2Q92974 986 aaKnown RBP4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 OTULINQ96BN8 352 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 TXNDC15Q96J42 360 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 SLC41A2Q96JW4 573 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 PPP1R13BQ96KQ4 1090 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 MUC13Q9H3R2 512 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 GPR108Q9NPR9 543 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 SEPT11Q9NVA2 429 aaKnown RBP4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 FBXO9Q9UK97 447 aaPredicted RBP4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 MYO6Q9UM54 1294 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 STON1Q9Y6Q2 735 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 DOCK7Q96N67 2140 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 HNRNPCL1O60812 293 aaKnown RBP4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 NKX2-2O95096 273 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 OAZ2O95190 189 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 CCNDBP1O95273 360 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 ARL3P36405 182 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 HTR6P50406 440 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 EIF5P55010 431 aaKnown RBP4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 BNC1Q01954 994 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 MAMLD1Q13495 774 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 NEDD9Q14511 834 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 EFNB3Q15768 340 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 EIF2S3LQ2VIR3 472 aaKnown RBP4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 TDRD12Q587J7 1177 aaKnown RBP4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 KLHL24Q6TFL4 600 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 NEK10Q6ZWH5 1172 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 WDR63Q8IWG1 891 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 OR14A16Q8NHC5 309 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 CREB3L4Q8TEY5 395 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 RND1Q92730 232 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 ZKSCAN4Q969J2 545 aaPredicted RBP4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 MIB2Q96AX9 1013 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 FAM149B1Q96BN6 582 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 LRFN5Q96NI6 719 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 FAM110AQ9BQ89 295 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 SLC25A33Q9BSK2 321 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 EHD2Q9NZN4 543 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 DLGAP2Q9P1A6 1054 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 SLC9A2Q9UBY0 812 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 AGO1Q9UL18 857 aaKnown RBP4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 CDC14AQ9UNH5 594 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 SLC45A1Q9Y2W3 748 aa4.36□□□□□ -1.71
RNU6-560P-201ENST00000364007 FAM90A8PA6NJQ4 464 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 LIPT2A6NK58 231 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 FTCDO95954 541 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 CH25HO95992 272 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 FAM90A13PP0C7W8 464 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 FAM90A24PP0C7X0 464 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 ACADMP11310 421 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 ZNF182P17025 639 aaPredicted RBP4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 HNRNPH1P31943 449 aaKnown RBP4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 CDKN2AP42771 156 aaKnown RBP4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 CLCN3P51790 818 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 CRYZQ08257 329 aaKnown RBP4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 CSTF3Q12996 717 aaKnown RBP4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 PAPPA-AS1Q5QFB9 102 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 NCEH1Q6PIU2 408 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 TMED8Q6PL24 325 aaPredicted RBP4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 FJX1Q86VR8 437 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 ZC3HC1Q86WB0 502 aaKnown RBP4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 FBXL14Q8N1E6 418 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 SPATA6LQ8N4H0 392 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 WDTC1Q8N5D0 677 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 OR14L1PQ8NHC6 308 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 NEK9Q8TD19 979 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 IGSF8Q969P0 613 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 HAUS8Q9BT25 410 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 FTOQ9C0B1 505 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 NDST4Q9H3R1 872 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 EIF2B3Q9NR50 452 aaKnown RBP4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 TBC1D22BQ9NU19 505 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 MAP3K20Q9NYL2 800 aaKnown RBP4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 PAM16Q9Y3D7 125 aa4.35□□□□□ -1.71
RNU6-560P-201ENST00000364007 A0A1W2PRG0 241 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 hDV102S1A0JD36 115 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 LINC01553A4QN01 128 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 CLEC18AA5D8T8 446 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 BTBD18B2RXH4 712 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 WNT9BO14905 357 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 ZBED4O75132 1171 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 TIPRLO75663 272 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 SERPINI2O75830 405 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 SCGB1D1O95968 90 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 GLUD1P00367 558 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 GPTP24298 496 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 C21orf33P30042 268 aaPredicted RBP4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 SSTR2P30874 369 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 HADHAP40939 763 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms