RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 THOP1P52888 689 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 USP46P62068 366 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 NFYCQ13952 458 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 RAB41Q5JT25 222 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 RNF219Q5W0B1 726 aaPredicted RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 FAM171BQ6P995 826 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 SAPCD2Q86UD0 394 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 PQLC1Q8N2U9 271 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 CD99L2Q8TCZ2 262 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 STYXQ8WUJ0 223 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 TLE6Q9H808 572 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 CAAP1Q9H8G2 361 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 GKN1Q9NS71 199 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 CLIC5Q9NZA1 410 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 CCDC162PA2VCL2 907 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 UBXN8O00124 270 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 CTPS1P17812 591 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 GNAZP19086 355 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 EEF1B2P24534 225 aaKnown RBP11.21□□□□□ -0.61
SSU72-202ENST00000359060 TTC3P53804 2025 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 PLOD1Q02809 727 aaPredicted RBP11.21□□□□□ -0.61
SSU72-202ENST00000359060 INPP5AQ14642 412 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 PARP15Q460N3 678 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 ZNF789Q5FWF6 425 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 ANKS3Q6ZW76 656 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 SPNS2Q8IVW8 549 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 STAG3L4Q8TBR4 150 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 ACTRT2Q8TDY3 377 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 NCLNQ969V3 563 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 LSM7Q9UK45 103 aaKnown RBP11.21□□□□□ -0.61
SSU72-202ENST00000359060 AGO1Q9UL18 857 aaKnown RBP11.21□□□□□ -0.61
SSU72-202ENST00000359060 PRPF19Q9UMS4 504 aaKnown RBP11.21□□□□□ -0.61
SSU72-202ENST00000359060 PCDHB9Q9Y5E1 797 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 A0A088AWK7 358 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 SAC3D1A6NKF1 404 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 SYCE1LA8MT33 242 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 ZBBXA8MT70 800 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 CAPN14A8MX76 684 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 HOXA2O43364 376 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 PEX1O43933 1283 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 CYBAP13498 195 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 HGFP14210 728 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 XRCC1P18887 633 aaPredicted RBP11.21□□□□□ -0.61
SSU72-202ENST00000359060 SP100P23497 879 aaPredicted RBP11.21□□□□□ -0.61
SSU72-202ENST00000359060 YBEYP58557 167 aaPredicted RBP11.21□□□□□ -0.61
SSU72-202ENST00000359060 FRG1Q14331 258 aaKnown RBP11.21□□□□□ -0.61
SSU72-202ENST00000359060 LRRC8DQ7L1W4 858 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 ARHGAP12Q8IWW6 846 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 MAB21L3Q8N8X9 362 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 IGSF8Q969P0 613 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 SDCCAG3Q96C92 435 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 IL12RB2Q99665 862 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 CLPBQ9H078 707 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 PLK2Q9NYY3 685 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 SCML2Q9UQR0 700 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 VPS9D1Q9Y2B5 631 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 SH3BP1Q9Y3L3 701 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 TIMM22Q9Y584 194 aa11.21□□□□□ -0.61
SSU72-202ENST00000359060 ZFP37Q9Y6Q3 630 aaPredicted RBP11.21□□□□□ -0.61
SSU72-202ENST00000359060 A8MT66 165 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 SLC7A4O43246 635 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 PGM3O95394 542 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 SLC7A2P52569 658 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 GNA12Q03113 381 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 NAIF1Q69YI7 327 aaPredicted RBP11.21□□□□□ -0.62
SSU72-202ENST00000359060 AMIGO2Q86SJ2 522 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 HGH1Q9BTY7 390 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 GPR62Q9BZJ7 368 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 EBF3Q9H4W6 596 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 NDUFAF1Q9Y375 327 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 SHROOM3Q8TF72 1996 aa11.21□□□□□ -0.62
SSU72-202ENST00000359060 NOL3O60936 208 aaKnown RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 RPP40O75818 363 aaKnown RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 NDST3O95803 873 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 EEF1DP29692 281 aaKnown RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 RECQLP46063 649 aaPredicted RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 RGS4P49798 205 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 IL10RBQ08334 325 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 SQLEQ14534 574 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 RIC8BQ9NVN3 520 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 COPG1Q9Y678 874 aaKnown RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 ZNF839A8K0R7 811 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 AZIN1O14977 448 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 CORO1AP31146 461 aaKnown RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 GRIA3P42263 894 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 PGFP49763 221 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 AQP4P55087 323 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 SMAD3P84022 425 aaKnown RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 SEMA3BQ13214 749 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 PITRM1Q5JRX3 1037 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 ZBTB49Q6ZSB9 765 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 DHFR2Q86XF0 187 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 CLYBLQ8N0X4 340 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 MIER2Q8N344 545 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 FNDC5Q8NAU1 212 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 RTP3Q9BQQ7 232 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 ZBED2Q9BTP6 218 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 CCDC28BQ9BUN5 200 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 C1orf21Q9H246 121 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms