RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FMO1Q01740 532 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 FAM91A1Q658Y4 838 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF517Q6ZMY9 492 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 CCDC115Q96NT0 180 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 LENG8Q96PV6 779 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 BTRCQ9Y297 605 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 TLL2Q9Y6L7 1015 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 AP2A2O94973 939 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 SLC15A1P46059 708 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 GMFBP60983 142 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 CACNB2Q08289 660 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ATF7IP2Q5U623 682 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PAOXQ6QHF9 649 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PKP2Q99959 881 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PIGUQ9H490 435 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 BTG4Q9NY30 223 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 RDH8Q9NYR8 311 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 UBXN8O00124 270 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 EI24O14681 340 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 NCAM2O15394 837 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 BNIP3LO60238 219 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 GSTM4Q03013 218 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PRKG2Q13237 762 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PFKFB4Q16877 469 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 RC3H1Q5TC82 1133 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 BORAQ6PGQ7 559 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 WDR49Q8IV35 697 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 COLGALT2Q8IYK4 626 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ALDH16A1Q8IZ83 802 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 SLC7A5P1Q8MH63 180 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PHTF2Q8N3S3 785 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 GAB3Q8WWW8 586 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 HPDLQ96IR7 371 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 CINPQ9BW66 212 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 SEMA4BQ9NPR2 832 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PAQR5Q9NXK6 330 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 EIF3KQ9UBQ5 218 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 MRPS7Q9Y2R9 242 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 E9PCH4 1651 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 CEP152O94986 1710 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 PRAMEF33A0A0G2JMD5 474 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 ATP6AP2A0A1C7CYW4 349 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 H7C2Y5 167 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 PRAMEF10O60809 474 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 CLTBP09497 229 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 MTHFD1P11586 935 aaKnown RBP6.09□□□□□ -1.44
VPS13B-203ENST00000358544 SREBF1P36956 1147 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 CD83Q01151 205 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 PTSQ03393 145 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 MVKQ03426 396 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 DAG1Q14118 895 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 ZRANB3Q5FWF4 1079 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 ZYG11AQ6WRX3 759 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.09□□□□□ -1.44
VPS13B-203ENST00000358544 GPSM1Q86YR5 675 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 CCDC185Q8N715 623 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF668Q96K58 619 aaPredicted RBP6.09□□□□□ -1.44
VPS13B-203ENST00000358544 MMP19Q99542 508 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 FARSBQ9NSD9 589 aaKnown RBP6.09□□□□□ -1.44
VPS13B-203ENST00000358544 KDELR1P24390 212 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 CDH13P55290 713 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 MAB21L1Q13394 359 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 RAB39AQ14964 217 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 SUZ12Q15022 739 aaKnown RBP6.09□□□□□ -1.44
VPS13B-203ENST00000358544 ANKRD22Q5VYY1 191 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 GALNT5Q7Z7M9 940 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 SCN4BQ8IWT1 228 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 FAM109AQ8N4B1 249 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 URGCPQ8TCY9 931 aa6.09□□□□□ -1.44
VPS13B-203ENST00000358544 CYP1A1P04798 512 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CHRM3P20309 590 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MAPKAPK2P49137 400 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 DDX39BQ13838 428 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SYTL3Q4VX76 610 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 UBE2UQ5VVX9 321 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 TPK1Q9H3S4 243 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 RAVER2Q9HCJ3 691 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 EGFL7Q9UHF1 273 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CFL2Q9Y281 166 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CNTNAP2Q9UHC6 1331 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 PBRM1Q86U86 1689 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ADRB2P07550 413 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MAPTP10636 758 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ANXA11P50995 505 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SWI5Q1ZZU3 235 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 PIGBQ92521 554 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 PPP3R2Q96LZ3 170 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 EBF4Q9BQW3 602 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CD93Q9NPY3 652 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ZSCAN32Q9NX65 697 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 LINC00032P0C843 101 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 RORCP51449 518 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SLC41A1Q8IVJ1 513 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 B3GALNT2Q8NCR0 500 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MSANTD3Q96H12 275 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 C17orf75Q9HAS0 396 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 KCNH7Q9NS40 1196 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MAP3K4Q9Y6R4 1608 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SCN5AQ14524 2016 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SETD2Q9BYW2 2564 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms