RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 C1QTNF2Q9BXJ5 285 aa15.58■□□□□ 0.09
TRIM13-201ENST00000356017 SLC17A9Q9BYT1 436 aa15.58■□□□□ 0.09
TRIM13-201ENST00000356017 ZFR2Q9UPR6 939 aaKnown RBP15.58■□□□□ 0.09
TRIM13-201ENST00000356017 DMTF1Q9Y222 760 aa15.58■□□□□ 0.09
TRIM13-201ENST00000356017 PLXND1Q9Y4D7 1925 aa15.58■□□□□ 0.08
TRIM13-201ENST00000356017 C1orf232A0A0U1RR37 186 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 IGLON5A6NGN9 336 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 A8MX80 341 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 USP12O75317 370 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 IGHV4-34P06331 123 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 DHPSP49366 369 aaPredicted RBP15.57■□□□□ 0.08
TRIM13-201ENST00000356017 PPP2CBP62714 309 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 PPP2CAP67775 309 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 ZNF284Q2VY69 593 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 LYSMD4Q5XG99 296 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 SEL1L3Q68CR1 1132 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 LRRC66Q68CR7 880 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 PPP1R21Q6ZMI0 780 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 DEFB119Q8N690 84 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 DNASE2BQ8WZ79 361 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 L2HGDHQ9H9P8 463 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 ZFYVE1Q9HBF4 777 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 UTP11Q9Y3A2 253 aaKnown RBP15.57■□□□□ 0.08
TRIM13-201ENST00000356017 ANKRD36A6QL64 1941 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 A0A1W2PPC4 97 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 EFCAB8A8MWE9 144 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 SMAPO00193 183 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 RAD51CO43502 376 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 LZTS3O60299 673 aaPredicted RBP15.57■□□□□ 0.08
TRIM13-201ENST00000356017 C6P13671 934 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 LHCGRP22888 699 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 CD27P26842 260 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 MAT2AP31153 395 aaKnown RBP15.57■□□□□ 0.08
TRIM13-201ENST00000356017 PTGER3P43115 390 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 SEMG2Q02383 582 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 OLIG2Q13516 323 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 KCNJ11Q14654 390 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 AGERQ15109 404 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 CNGA3Q16281 694 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 DENND5AQ6IQ26 1287 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 C8orf74Q6P047 294 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 SLC41A1Q8IVJ1 513 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 PPIL6Q8IXY8 311 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 RGL4Q8IZJ4 473 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 CBARPQ8N350 705 aaPredicted RBP15.57■□□□□ 0.08
TRIM13-201ENST00000356017 MMGT1Q8N4V1 131 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 BLOC1S5Q8TDH9 187 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 CPT1BQ92523 772 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 SNX19Q92543 992 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 GPR63Q9BZJ6 419 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 RAB17Q9H0T7 212 aa15.57■□□□□ 0.08
TRIM13-201ENST00000356017 RRAGDQ9NQL2 400 aaPredicted RBP15.57■□□□□ 0.08
TRIM13-201ENST00000356017 EML5Q05BV3 1969 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 DNALI1O14645 258 aaPredicted RBP15.56■□□□□ 0.08
TRIM13-201ENST00000356017 CLDN7O95471 211 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 CRTAMO95727 393 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 PAK4O96013 591 aaPredicted RBP15.56■□□□□ 0.08
TRIM13-201ENST00000356017 PIRTP0C851 137 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 HMGCLP35914 325 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 NBL1P41271 181 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 PDE1BQ01064 536 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 CREB5Q02930 508 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 PTSQ03393 145 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 ACOX1Q15067 660 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 CDKN3Q16667 212 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 TSPAN33Q86UF1 283 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 HOOK3Q86VS8 718 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 BBOF1Q8ND07 529 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 MCUQ8NE86 351 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 OR52K1Q8NGK4 314 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 BRSK1Q8TDC3 778 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 SNF8Q96H20 258 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 LENG8Q96PV6 779 aaPredicted RBP15.56■□□□□ 0.08
TRIM13-201ENST00000356017 ERP44Q9BS26 406 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 TRIM51Q9BSJ1 452 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 CASS4Q9NQ75 786 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 ZNF711Q9Y462 761 aa15.56■□□□□ 0.08
TRIM13-201ENST00000356017 RGSL1A5PLK6 1076 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 C2orf81A6NN90 581 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 PRAMEF26H0Y7S4 382 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 WNT9AO14904 365 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 RECQL5O94762 991 aaPredicted RBP15.55■□□□□ 0.08
TRIM13-201ENST00000356017 HNRNPA2B1P22626 353 aaKnown RBP15.55■□□□□ 0.08
TRIM13-201ENST00000356017 IVDP26440 423 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 HOXD12P35452 270 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 STC1P52823 247 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 LAMB3Q13751 1172 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 PTPRRQ15256 657 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 KCTD19Q17RG1 926 aaPredicted RBP15.55■□□□□ 0.08
TRIM13-201ENST00000356017 GLE1Q53GS7 698 aaKnown RBP15.55■□□□□ 0.08
TRIM13-201ENST00000356017 RNASEH2BQ5TBB1 312 aaKnown RBP15.55■□□□□ 0.08
TRIM13-201ENST00000356017 DENND2CQ68D51 928 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 LAIR1Q6GTX8 287 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 LRRC8BQ6P9F7 803 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 ARMCX6Q7L4S7 300 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 LYSMD3Q7Z3D4 306 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 CYP2U1Q7Z449 544 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 GLT6D1Q7Z4J2 308 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 TMC3Q7Z5M5 1100 aa15.55■□□□□ 0.08
TRIM13-201ENST00000356017 COQ10AQ96MF6 247 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms