RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 BTLAQ7Z6A9 289 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 ZNF683Q8IZ20 524 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 TRIM56Q9BRZ2 755 aaKnown RBP10.17□□□□□ -0.78
SYNE1-203ENST00000354674 TMEM109Q9BVC6 243 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 CCDC68Q9H2F9 335 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 SAE1Q9UBE0 346 aaPredicted RBP10.17□□□□□ -0.78
SYNE1-203ENST00000354674 OR12D3Q9UGF7 316 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 PSMD12O00232 456 aaPredicted RBP10.17□□□□□ -0.78
SYNE1-203ENST00000354674 CLASP2O75122 1294 aaKnown RBP10.17□□□□□ -0.78
SYNE1-203ENST00000354674 TM7SF2O76062 418 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 C8AP07357 584 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 CHRNB1P11230 501 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 MAGP20916 626 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 HOXA9P31269 272 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 EIF3EP60228 445 aaKnown RBP10.17□□□□□ -0.78
SYNE1-203ENST00000354674 DYNLT1P63172 113 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 GPM6BQ13491 265 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 TRMT5Q32P41 509 aaKnown RBP10.17□□□□□ -0.78
SYNE1-203ENST00000354674 C10orf120Q5SQS8 335 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 HECTD3Q5T447 861 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 UBE2UQ5VVX9 321 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 ZCCHC23Q6ZST2 131 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 C11orf74Q86VG3 221 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 ALLCQ8N6M5 410 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 NAT16Q8N8M0 369 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 FAR2Q96K12 515 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 NAA50Q9GZZ1 169 aaKnown RBP10.17□□□□□ -0.78
SYNE1-203ENST00000354674 GID8Q9NWU2 228 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 DNMT3LQ9UJW3 386 aa10.17□□□□□ -0.78
SYNE1-203ENST00000354674 PCM1Q15154 2024 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 KRBA1A5PL33 1030 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 EEF2KO00418 725 aaKnown RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 COCHO43405 550 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 PAGE1O75459 146 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 KCNH1O95259 989 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 ESRRBO95718 433 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 OLFM2O95897 454 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 POU2F2P09086 479 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 ETS1P14921 441 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 ATP5C1P36542 298 aaKnown RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 MLLT6P55198 1093 aaPredicted RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 MRPS22P82650 360 aaKnown RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 SLC10A2Q12908 348 aaPredicted RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 RAB30Q15771 203 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 CRY1Q16526 586 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 FGD3Q5JSP0 725 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 NPNTQ6UXI9 565 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 NET1Q7Z628 596 aaPredicted RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 TSPAN14Q8NG11 270 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 PDCD6IPQ8WUM4 868 aaKnown RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 EBF4Q9BQW3 602 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 LMAN2LQ9H0V9 348 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 KCNK13Q9HB14 408 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 TRPV5Q9NQA5 729 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 DAPK2Q9UIK4 370 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 HS3ST4Q9Y661 456 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 DENND4CQ5VZ89 1909 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 CCRL2O00421 344 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 BIRC5O15392 142 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 LRIG2O94898 1065 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 IVDP26440 423 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 NDST2P52849 883 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 EPHA5P54756 1037 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 CCNIQ14094 377 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 PHKG1Q16816 387 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 TJAP1Q5JTD0 557 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 GPR107Q5VW38 600 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 RNF34Q969K3 372 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 FEM1CQ96JP0 617 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 NOL6Q9H6R4 1146 aaKnown RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 BCAP29Q9UHQ4 241 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 RAD54BQ9Y620 910 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 AQP9O43315 295 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 LRG1P02750 347 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 FAM58BPP0C7Q3 252 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 TRAF2Q12933 501 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 PIK3R6Q5UE93 754 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 TMC5Q6UXY8 1006 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 CHST15Q7LFX5 561 aaPredicted RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 ANKK1Q8NFD2 765 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 SUN5Q8TC36 379 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 DENND1AQ8TEH3 1009 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 GFM2Q969S9 779 aaKnown RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 RTP4Q96DX8 246 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 BTN2A3PQ96KV6 586 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 PPP1R36Q96LQ0 422 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 DTLQ9NZJ0 730 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 XPO7Q9UIA9 1087 aaKnown RBP10.16□□□□□ -0.78
SYNE1-203ENST00000354674 SNX10Q9Y5X0 201 aa10.16□□□□□ -0.78
SYNE1-203ENST00000354674 IGLV3-10A0A075B6K4 115 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 SLC12A8A0AV02 714 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 BCLAF3A2AJT9 711 aaKnown RBP10.15□□□□□ -0.78
SYNE1-203ENST00000354674 CFLARO15519 480 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 LPXNO60711 386 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 ATE1O95260 518 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 WEE1P30291 646 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 AQP5P55064 265 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 TPI1P60174 286 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 CTBSQ01459 385 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms