RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ITPKAP23677 461 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 PTGIRP43119 386 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 PKNOX1P55347 436 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 INCA1Q0VD86 236 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 TEAD2Q15562 447 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 NAPRTQ6XQN6 538 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 SYT12Q8IV01 421 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 SOHLH2Q9NX45 425 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 INSL5Q9Y5Q6 135 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 PRMT5O14744 637 aaPredicted RBP13.74□□□□□ -0.21
SMC6-201ENST00000351948 SLC35G4P0C7Q5 338 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 TPSB2P20231 275 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 GDI1P31150 447 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 MAPKAPK2P49137 400 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 HNRNPDQ14103 355 aaKnown RBP13.74□□□□□ -0.21
SMC6-201ENST00000351948 TPSAB1Q15661 275 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 CYP2A13Q16696 494 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 SLC39A5Q6ZMH5 540 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 CENPLQ8N0S6 344 aaPredicted RBP13.74□□□□□ -0.21
SMC6-201ENST00000351948 FAXDC2Q96IV6 333 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 RHOJQ9H4E5 214 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 GSAPA4D1B5 854 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 CNTN5O94779 1100 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 ITGB1P05556 798 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 ERVK-21P61565 698 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 GRM3Q14832 879 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 NCBP2-AS2Q69YL0 99 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 ZNF621Q6ZSS3 439 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 RAVER1Q8IY67 606 aaKnown RBP13.74□□□□□ -0.21
SMC6-201ENST00000351948 KYQ8NBH2 561 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 DDX1Q92499 740 aaKnown RBP13.74□□□□□ -0.21
SMC6-201ENST00000351948 TEKT5Q96M29 485 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 GPR21Q99679 349 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 NDUFAF1Q9Y375 327 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 MYH6P13533 1939 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
SMC6-201ENST00000351948 MRASO14807 208 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 PSMA4P25789 261 aaKnown RBP13.74□□□□□ -0.21
SMC6-201ENST00000351948 C10orf53Q8N6V4 93 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 SKA1Q96BD8 255 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 NR1H4Q96RI1 486 aaPredicted RBP13.74□□□□□ -0.21
SMC6-201ENST00000351948 TMEM175Q9BSA9 504 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 THEGQ9P2T0 379 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 ARL5AQ9Y689 179 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 PTGESO14684 152 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 GCATO75600 419 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 FTH1P02794 183 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 PRKAG1P54619 331 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 ALDH6A1Q02252 535 aaKnown RBP13.73□□□□□ -0.21
SMC6-201ENST00000351948 XKR6Q5GH73 641 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 HECTD2Q5U5R9 776 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 GPRIN1Q7Z2K8 1008 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 UNC5BQ8IZJ1 945 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 NXNL1Q96CM4 212 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 CLIP3Q96DZ5 547 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 DACH2Q96NX9 599 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 C4AP0C0L4 1744 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 WDR47O94967 919 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 PROCP04070 461 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 HSPA1AP0DMV8 641 aaKnown RBP13.73□□□□□ -0.21
SMC6-201ENST00000351948 HSPA1BP0DMV9 641 aaKnown RBP13.73□□□□□ -0.21
SMC6-201ENST00000351948 ATP6V1B2P21281 511 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 UBXN2BQ14CS0 331 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 SNAP47Q5SQN1 464 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 MPP5Q8N3R9 675 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 EFCAB3Q8N7B9 438 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 ZNF555Q8NEP9 628 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 ZSCAN18Q8TBC5 510 aaPredicted RBP13.73□□□□□ -0.21
SMC6-201ENST00000351948 FERD3LQ96RJ6 166 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 KAT6AQ92794 2004 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 CCDC154A6NI56 674 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 FFAR2O15552 330 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 RASSF9O75901 435 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 SOD2P04179 222 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 HLA-DQB2P05538 268 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 LINC00032P0C843 101 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 CES1P23141 567 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 POU1F1P28069 291 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 NDST2P52849 883 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 HADHBP55084 474 aaKnown RBP13.73□□□□□ -0.21
SMC6-201ENST00000351948 IL10RBQ08334 325 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 PHKG1Q16816 387 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 RTP2Q5QGT7 225 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 IQCKQ8N0W5 287 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 CMASQ8NFW8 434 aaPredicted RBP13.73□□□□□ -0.21
SMC6-201ENST00000351948 RIPOR3Q96MK2 946 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 PEBP4Q96S96 227 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 AHSPQ9NZD4 102 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 VTI1BQ9UEU0 232 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 PSMD13Q9UNM6 376 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 CACNB4O00305 520 aaPredicted RBP13.73□□□□□ -0.21
SMC6-201ENST00000351948 EDN1P05305 212 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 TIE1P35590 1138 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 AFF1P51825 1210 aaKnown RBP13.73□□□□□ -0.21
SMC6-201ENST00000351948 MED21Q13503 144 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 SPDYCQ5MJ68 293 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 SNX30Q5VWJ9 437 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 CYB5D1Q6P9G0 228 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 ESAMQ96AP7 390 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 MRPL57Q9BQC6 102 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms