RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SNAP29O95721 258 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 MT-CO1P00395 513 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 NCAM1P13591 858 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 IL10P22301 178 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 TCEA1P23193 301 aaKnown RBP18.71■□□□□ 0.59
SCARF1-202ENST00000348987 RAD23AP54725 363 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 C1QTNF8P60827 252 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 BST2Q10589 180 aaKnown RBP18.71■□□□□ 0.59
SCARF1-202ENST00000348987 USP10Q14694 798 aaKnown RBP18.71■□□□□ 0.59
SCARF1-202ENST00000348987 KCNMB4Q86W47 210 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 DEFB106AQ8N104 65 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 DNAAF3Q8N9W5 541 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 STON2Q8WXE9 905 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 CNDP2Q96KP4 475 aaKnown RBP18.71■□□□□ 0.59
SCARF1-202ENST00000348987 ZNF641Q96N77 438 aaPredicted RBP18.71■□□□□ 0.59
SCARF1-202ENST00000348987 OSMRQ99650 979 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 NDEL1Q9GZM8 345 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 CCDC78A2IDD5 438 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 SEC14L2O76054 403 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 BEST1O76090 585 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 MYO1DO94832 1006 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 MBL2P11226 248 aaPredicted RBP18.71■□□□□ 0.59
SCARF1-202ENST00000348987 EEF1DP29692 281 aaKnown RBP18.71■□□□□ 0.59
SCARF1-202ENST00000348987 SQLEQ14534 574 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 KYAT1Q16773 422 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 TSTD2Q5T7W7 516 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 TMEM135Q86UB9 458 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 NT5DC4Q86YG4 428 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 DDIASQ8IXT1 998 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 ZNF567Q8N184 647 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 RAB2BQ8WUD1 216 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 CENPNQ96H22 339 aaPredicted RBP18.71■□□□□ 0.59
SCARF1-202ENST00000348987 RPL10LQ96L21 214 aaKnown RBP18.71■□□□□ 0.59
SCARF1-202ENST00000348987 PSD2Q9BQI7 771 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 SMPD3Q9NY59 655 aaPredicted RBP18.71■□□□□ 0.59
SCARF1-202ENST00000348987 VANGL2Q9ULK5 521 aa18.71■□□□□ 0.59
SCARF1-202ENST00000348987 TARM1B6A8C7 271 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 KCNK1O00180 336 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 CLDN5O00501 218 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 NDUFV1P49821 464 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 PRKAA2P54646 552 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 IFITM3Q01628 133 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 SPCS2Q15005 226 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 ANO4Q32M45 955 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 OTUD1Q5VV17 481 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 IRAK1BP1Q5VVH5 260 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 ARHGAP17Q68EM7 881 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 FAM45BPQ6NSW5 357 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 C8orf82Q6P1X6 216 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 RPS27LQ71UM5 84 aaKnown RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 CATSPER4Q7RTX7 472 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 CENPLQ8N0S6 344 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 PDPRQ8NCN5 879 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 FAM45AQ8TCE6 357 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 HDAC10Q969S8 669 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 EFHD2Q96C19 240 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 GPN2Q9H9Y4 310 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 SPON1Q9HCB6 807 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 TNFRSF12AQ9NP84 129 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 TBC1D13Q9NVG8 400 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 SCN4AP35499 1836 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 FAM47E-STBD1D6RA91 191 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 SYNCRIPO60506 623 aaKnown RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 GPC4O75487 556 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 SLC35E2BP0CK96 405 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 PSMA4P25789 261 aaKnown RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 IFRD2Q12894 506 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 CLPPQ16740 277 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 CCNYL2Q5T2Q4 361 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 CERCAMQ5T4B2 595 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 PID1Q7Z2X4 250 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 ZDHHC17Q8IUH5 632 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 CTRCQ99895 268 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 SLC25A23Q9BV35 468 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 CHRAC1Q9NRG0 131 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 DNMT3BQ9UBC3 853 aaKnown RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 GTF2IRD1Q9UHL9 959 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 TLL2Q9Y6L7 1015 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 ZNF487B1APH4 448 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 NME4O00746 187 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 PAX3P23760 479 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 BCAT1P54687 386 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 SOX4Q06945 474 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-202ENST00000348987 ADIGQ0VDE8 80 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 ZNF846Q147U1 533 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 XAF1Q6GPH4 301 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 SPRED1Q7Z699 444 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 DSG4Q86SJ6 1040 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 SLC10A4Q96EP9 437 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 BEGAINQ9BUH8 593 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 OSBPL2Q9H1P3 480 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 PRDM12Q9H4Q4 367 aa18.7■□□□□ 0.58
SCARF1-202ENST00000348987 NEMP2A6NFY4 417 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 ARL4AP40617 200 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 SULT1E1P49888 294 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 TPTEP56180 551 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 INPP5AQ14642 412 aa18.69■□□□□ 0.58
SCARF1-202ENST00000348987 ZNF792Q3KQV3 632 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms