RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 PRMT2P55345 433 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 RTP1P59025 263 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SPIBQ01892 262 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 GALNT7Q86SF2 657 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 FAM89AQ96GI7 184 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ZNF594Q96JF6 807 aaPredicted RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 PSD2Q9BQI7 771 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ADGRE3Q9BY15 652 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CHIAQ9BZP6 476 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 GDF3Q9NR23 364 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 USP18Q9UMW8 372 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ALG6Q9Y672 507 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CYP3A7-CYP3A51PA0A087WV96 503 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 H0YJX3 145 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CYP26A1O43174 497 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ATMINO43313 823 aaPredicted RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 PAPSS2O95340 614 aaPredicted RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 PGAM1P18669 254 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CYP3A7P24462 503 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 AARDQ4LEZ3 155 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SKA3Q8IX90 412 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 OR56A4Q8NGH8 313 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 OR2L2Q8NH16 312 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CD101Q93033 1021 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 DPY30Q9C005 99 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 UFSP2Q9NUQ7 469 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SORL1Q92673 2214 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 KIAA0556O60303 1618 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 RGPD8O14715 1765 aaPredicted RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 SUV39H1O43463 412 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 BPNT1O95861 308 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CHRM3P20309 590 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 RAB3BP20337 219 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 IGFBP5P24593 272 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MAN2A2P49641 1150 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CREB5Q02930 508 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ZBED5Q49AG3 693 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SPANXN3Q5MJ09 141 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 KCTD1Q719H9 257 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MFSD8Q8NHS3 518 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SLC22A8Q8TCC7 542 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 C1GALT1C1Q96EU7 318 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 HSPBAP1Q96EW2 488 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PAGR1Q9BTK6 254 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PBDC1Q9BVG4 233 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 NMRAL1Q9HBL8 299 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SPON1Q9HCB6 807 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PLAGL2Q9UPG8 496 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 IGF1RP08069 1367 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ANXA2P2A6NMY6 339 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 WDR62O43379 1518 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SNX3O60493 162 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 RAD17O75943 681 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 TM7SF2O76062 418 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CRTAMO95727 393 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ANXA2P07355 339 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 TMEM253P0C7T8 217 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MUTP22033 750 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 TCF7P36402 384 aaPredicted RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 TSPAN5P62079 268 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SLC3A1Q07837 685 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 AIMP2Q13155 320 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 SNRNP35Q16560 246 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 GXYLT1Q4G148 440 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 NKAPLQ5M9Q1 402 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 HERC6Q8IVU3 1022 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 NELL1Q92832 810 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 KCNS3Q9BQ31 491 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 VPS25Q9BRG1 176 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 RC3H2Q9HBD1 1191 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 BRD7Q9NPI1 651 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PNMA3Q9UL41 463 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 NCOA3Q9Y6Q9 1424 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ACEP12821 1306 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 FXYD6-FXYD2A0A087WZ82 144 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 FAM230AA0A1W2PPH8 454 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 LGR5O75473 907 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 FTH1P02794 183 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 RBP3P10745 1247 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 TAGLNQ01995 201 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 GPR139Q6DWJ6 353 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MSANTD2Q6P1R3 559 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ZNF529Q6P280 563 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 NUDT18Q6ZVK8 323 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SNX20Q7Z614 316 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SVBPQ8N300 66 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 COQ8AQ8NI60 647 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ZBED3Q96IU2 234 aaPredicted RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 MAELQ96JY0 434 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 BIRC8Q96P09 236 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 LXNQ9BS40 222 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SLC4A5Q9BY07 1137 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 FXYD6Q9H0Q3 95 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 STK32BQ9NY57 414 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PPIEQ9UNP9 301 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 ADAMDEC1O15204 470 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SORBS3O60504 671 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 FARS2O95363 451 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 APOC3P02656 99 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 UMPSP11172 480 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms