RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 HMG20AQ9NP66 347 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 CAB39Q9Y376 341 aaPredicted RBP12.66□□□□□ -0.38
DFFB-202ENST00000339350 ANK1P16157 1881 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 GCATO75600 419 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 USP2O75604 605 aaPredicted RBP12.66□□□□□ -0.38
DFFB-202ENST00000339350 GNAO1P09471 354 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 XRCC1P18887 633 aaPredicted RBP12.66□□□□□ -0.38
DFFB-202ENST00000339350 BFSP2Q13515 415 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 MBLAC2Q68D91 279 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 METTL2BQ6P1Q9 378 aaKnown RBP12.66□□□□□ -0.38
DFFB-202ENST00000339350 PTAR1Q7Z6K3 402 aaPredicted RBP12.66□□□□□ -0.38
DFFB-202ENST00000339350 C7orf31Q8N865 590 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 TMEM102Q8N9M5 508 aaPredicted RBP12.66□□□□□ -0.38
DFFB-202ENST00000339350 TTLQ8NG68 377 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 ADAM32Q8TC27 787 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 VPS33AQ96AX1 596 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 ZNF560Q96MR9 790 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 CHID1Q9BWS9 393 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 SYTL2Q9HCH5 934 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 PNPLA8Q9NP80 782 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 TMEM216Q9P0N5 145 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 ITGA11Q9UKX5 1188 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 AP3M1Q9Y2T2 418 aa12.66□□□□□ -0.38
DFFB-202ENST00000339350 OR5K4A6NMS3 321 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 NEMP1O14524 444 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 SLC22A1O15245 554 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 CCNKO75909 580 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 ERVK-10P10266 1014 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 RPS12P25398 132 aaKnown RBP12.65□□□□□ -0.38
DFFB-202ENST00000339350 MGAT1P26572 445 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 CRHR1P34998 444 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 CASP3P42574 277 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 OR3A3P47888 321 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 POLR2GP62487 172 aaKnown RBP eCLIP12.65□□□□□ -0.38
DFFB-202ENST00000339350 OCA2Q04671 838 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 GOLGA7BQ2TAP0 167 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 PPP1R26Q5T8A7 1209 aaPredicted RBP12.65□□□□□ -0.38
DFFB-202ENST00000339350 PDPK2PQ6A1A2 396 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 ACOT1Q86TX2 421 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 TMEM126BQ8IUX1 230 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 SNX19Q92543 992 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 NXPE3Q969Y0 559 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 DEPDC7Q96QD5 511 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 XPNPEP3Q9NQH7 507 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 PLSCR3Q9NRY6 295 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 MAT2BQ9NZL9 334 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 LCTP09848 1927 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 FADS2P1A8MWK0 482 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 ENDOD1O94919 500 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 STAG3L1P0CL83 205 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 TSHRP16473 764 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 SLC26A3P40879 764 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 EFNA5P52803 228 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 PCLAFQ15004 111 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 SNX17Q15036 470 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 KCTD8Q6ZWB6 473 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 ZNF354CQ86Y25 554 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 FAM109AQ8N4B1 249 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 JPH3Q8WXH2 748 aaPredicted RBP12.65□□□□□ -0.38
DFFB-202ENST00000339350 NDRG1Q92597 394 aaKnown RBP12.65□□□□□ -0.38
DFFB-202ENST00000339350 HPDLQ96IR7 371 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 BCO2Q9BYV7 579 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 EPS8L2Q9H6S3 715 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 SIP14410 1827 aa12.65□□□□□ -0.38
DFFB-202ENST00000339350 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.64□□□□□ -0.39
DFFB-202ENST00000339350 FAM159BA6NKW6 160 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 RFPL2O75678 378 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 SEMA3DO95025 777 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 SDC4P31431 198 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 SERPINB5P36952 375 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 CCR10P46092 362 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 IDH3AP50213 366 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 BLVRAP53004 296 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 VAC14Q08AM6 782 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 SHEQ5VZ18 495 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 ADAMTSL2Q86TH1 951 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 ARMC8Q8IUR7 673 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 OR2T3Q8NH03 318 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 ZFP90Q8TF47 636 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 RASSF5Q8WWW0 418 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 TM9SF2Q99805 663 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 CAB39LQ9H9S4 337 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 HPS4Q9NQG7 708 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 TESMINQ9Y4I5 508 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 PARP14Q460N5 1801 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 PHIPQ8WWQ0 1821 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 RLFQ13129 1914 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 SSC5DA1L4H1 1573 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 PRSS51A0A1B0GVH4 220 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 OR5F1O95221 314 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 PFKMP08237 780 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 SAT1P21673 171 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 CD9P21926 228 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 CLCNKBP51801 687 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 KIZQ2M2Z5 673 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 NDUFAF5Q5TEU4 345 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 ZFP1Q6P2D0 407 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 TP53INP2Q8IXH6 220 aa12.64□□□□□ -0.39
DFFB-202ENST00000339350 AADATQ8N5Z0 425 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms