RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ITGB2P05107 769 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 ELFN1P0C7U0 828 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 PNLIPP16233 465 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 DESP17661 470 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 KELP23276 732 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 NDST2P52849 883 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 MYL5Q02045 173 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 NFATC3Q12968 1075 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 STX1AQ16623 288 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 C14orf28Q4W4Y0 310 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 SPRED1Q7Z699 444 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 PAF1Q8N7H5 531 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 EXD3Q8N9H8 876 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 TSEN2Q8NCE0 465 aaKnown RBP15.7■□□□□ 0.1
LINC01116-202ENST00000339037 FUBP1Q96AE4 644 aaKnown RBP15.7■□□□□ 0.1
LINC01116-202ENST00000339037 CELF6Q96J87 481 aaKnown RBP15.7■□□□□ 0.1
LINC01116-202ENST00000339037 CMKLR1Q99788 373 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 ARHGAP9Q9BRR9 750 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 HSD3B7Q9H2F3 369 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 ANO10Q9NW15 660 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 SEPT10Q9P0V9 454 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 LIMA1Q9UHB6 759 aaKnown RBP15.7■□□□□ 0.1
LINC01116-202ENST00000339037 HEMK1Q9Y5R4 338 aaPredicted RBP15.7■□□□□ 0.1
LINC01116-202ENST00000339037 LRP4O75096 1905 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 TCRBV5S1A1TA0A578 114 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 CFAP69A5D8W1 941 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 ARHGAP42A6NI28 874 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 LGALS16A8MUM7 142 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 B4DGG1 531 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 AGRPO00253 132 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 NUDT21O43809 227 aaKnown RBP15.69■□□□□ 0.1
LINC01116-202ENST00000339037 PALMO75781 387 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 WISP1O95388 367 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 ITIH1P19827 911 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 RGRP47804 291 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 PAPOLAP51003 745 aaKnown RBP15.69■□□□□ 0.1
LINC01116-202ENST00000339037 ZFP36L1Q07352 338 aaKnown RBP15.69■□□□□ 0.1
LINC01116-202ENST00000339037 RALGDSQ12967 914 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 SRSF6Q13247 344 aaKnown RBP15.69■□□□□ 0.1
LINC01116-202ENST00000339037 ARHGEF7Q14155 803 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 DCUN1D2Q6PH85 259 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 SRLQ86TD4 932 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 ECHDC3Q96DC8 303 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 PCMTD1Q96MG8 357 aaPredicted RBP15.69■□□□□ 0.1
LINC01116-202ENST00000339037 TMEM168Q9H0V1 697 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 DPEP2Q9H4A9 486 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 WDR26Q9H7D7 661 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 MRPL40Q9NQ50 206 aaKnown RBP15.69■□□□□ 0.1
LINC01116-202ENST00000339037 LRIT1Q9P2V4 623 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 RNF215Q9Y6U7 377 aa15.69■□□□□ 0.1
LINC01116-202ENST00000339037 PRAMEF33A0A0G2JMD5 474 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 TNFRSF10CO14798 259 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 PRAMEF10O60809 474 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 CSNK1DP48730 415 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 POLR2LP62875 67 aaKnown RBP15.68■□□□□ 0.1
LINC01116-202ENST00000339037 BCL2L1Q07817 233 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 HLTFQ14527 1009 aaKnown RBP eCLIP15.68■□□□□ 0.1
LINC01116-202ENST00000339037 NCAPHQ15003 741 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 LINC00303Q3SY05 128 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 MAP9Q49MG5 647 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 MANEAQ5SRI9 462 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 PHF19Q5T6S3 580 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 SPECC1LQ69YQ0 1117 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 OGFOD3Q6PK18 319 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 XKR5Q6UX68 686 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 LIPIQ6XZB0 460 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 DPPA4Q7L190 304 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 APTXQ7Z2E3 356 aaKnown RBP15.68■□□□□ 0.1
LINC01116-202ENST00000339037 SFTPA2Q8IWL1 248 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 NEK11Q8NG66 645 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 EXTL1Q92935 676 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 CINPQ9BW66 212 aaPredicted RBP15.68■□□□□ 0.1
LINC01116-202ENST00000339037 SLC39A8Q9C0K1 460 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 CYP4F12Q9HCS2 524 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 MOSPD1Q9UJG1 213 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 AP4E1Q9UPM8 1137 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 PCDHB11Q9Y5F2 797 aa15.68■□□□□ 0.1
LINC01116-202ENST00000339037 LRRK2Q5S007 2527 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 EIF3CLB5ME19 914 aaKnown RBP15.67■□□□□ 0.1
LINC01116-202ENST00000339037 GOLGA6L22H0YM25 854 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 PDE2AO00408 941 aaPredicted RBP15.67■□□□□ 0.1
LINC01116-202ENST00000339037 EEF2KO00418 725 aaKnown RBP15.67■□□□□ 0.1
LINC01116-202ENST00000339037 HOXC4P09017 264 aaPredicted RBP15.67■□□□□ 0.1
LINC01116-202ENST00000339037 TRIM23P36406 574 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 MAPK10P53779 464 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 UBXN1Q04323 297 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 AFMIDQ63HM1 303 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 VASH2Q86V25 355 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 SLITRK4Q8IW52 837 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 ZSCAN1Q8NBB4 408 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 ANKRD20A12PQ8NF67 263 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 CCL4L1Q8NHW4 92 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 KIAA1524Q8TCG1 905 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 EIF3CQ99613 913 aaKnown RBP15.67■□□□□ 0.1
LINC01116-202ENST00000339037 AGPAT1Q99943 283 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 LGR4Q9BXB1 951 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 SP110Q9HB58 689 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 GPATCH2LQ9NWQ4 482 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 FOXJ2Q9P0K8 574 aa15.67■□□□□ 0.1
LINC01116-202ENST00000339037 A0A1W2PQC6 194 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms