RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CWC15Q9P013 229 aaKnown RBP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 PNMA8BQ9ULN7 279 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 BZW2Q9Y6E2 419 aaKnown RBP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 KALRNO60229 2985 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 CCDC187A0A096LP49 1063 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 CAPN8A6NHC0 703 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 ZW10O43264 779 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 LRCH4O75427 683 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 CELA2BP08218 269 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-202ENST00000337571 HOXC4P09017 264 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-202ENST00000337571 SKILP12757 684 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 KRT10P13645 584 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 PCK1P35558 622 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 HSPA9P38646 679 aaKnown RBP10.7□□□□□ -0.7
CAPN3-202ENST00000337571 MLLT3P42568 568 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-202ENST00000337571 RGRP47804 291 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 SLC10A7Q0GE19 358 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 ARHGEF7Q14155 803 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 PIGHQ14442 188 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-202ENST00000337571 ARHGAP40Q5TG30 622 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 LIPIQ6XZB0 460 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 DPPA4Q7L190 304 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 ZSWIM9Q86XI8 627 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 NDUFAF2Q8N183 169 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 ARFGAP1Q8N6T3 406 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 PLA2G15Q8NCC3 412 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 HSPH1Q92598 858 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 FUBP1Q96AE4 644 aaKnown RBP10.7□□□□□ -0.7
CAPN3-202ENST00000337571 CCDC74AQ96AQ1 378 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 ECHDC3Q96DC8 303 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 TMEM74Q96NL1 305 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 PEBP4Q96S96 227 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 RBM15Q96T37 977 aaKnown RBP eCLIP10.7□□□□□ -0.7
CAPN3-202ENST00000337571 DPEP2Q9H4A9 486 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 CPNE5Q9HCH3 593 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 EPB41L5Q9HCM4 733 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 CYP4F12Q9HCS2 524 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 ASCL3Q9NQ33 180 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 DGKBQ9Y6T7 804 aa10.7□□□□□ -0.7
CAPN3-202ENST00000337571 ATMQ13315 3056 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 A0A1B0GTH6 734 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 TMEM202A6NGA9 273 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 DDX3XO00571 662 aaKnown RBP eCLIP10.69□□□□□ -0.7
CAPN3-202ENST00000337571 TNFRSF10CO14798 259 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 RPLP0P05388 317 aaKnown RBP10.69□□□□□ -0.7
CAPN3-202ENST00000337571 CYP2A6P11509 494 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-202ENST00000337571 GLB1P16278 677 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 AMPD1P23109 780 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 SERPINB6P35237 376 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 SSR1P43307 286 aaKnown RBP10.69□□□□□ -0.7
CAPN3-202ENST00000337571 INHBCP55103 352 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 CDH6P55285 790 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 KIAA1024LP59773 190 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 CCL7P80098 99 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 RHDQ02161 417 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 VAC14Q08AM6 782 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 EIF3IQ13347 325 aaKnown RBP10.69□□□□□ -0.7
CAPN3-202ENST00000337571 BIRC2Q13490 618 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 PEX6Q13608 980 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 NR1I3Q14994 352 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 NFKBIBQ15653 356 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 SMTNL2Q2TAL5 461 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 TDRD12Q587J7 1177 aaKnown RBP10.69□□□□□ -0.7
CAPN3-202ENST00000337571 MARC1Q5VT66 337 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 DENND2CQ68D51 928 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 PNCKQ6P2M8 343 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 ARHGAP36Q6ZRI8 547 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 ARHGAP12Q8IWW6 846 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 FBXO39Q8N4B4 442 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 NPWQ8N729 165 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 Q8N9G6 341 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-202ENST00000337571 KYQ8NBH2 561 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 NAP1L5Q96NT1 182 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-202ENST00000337571 TRIM7Q9C029 511 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 ISCUQ9H1K1 167 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 LRRN3Q9H3W5 708 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 WDR26Q9H7D7 661 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.69□□□□□ -0.7
CAPN3-202ENST00000337571 HAUS2Q9NVX0 235 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 TMEM63CQ9P1W3 806 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 IP6K2Q9UHH9 426 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 PHTF1Q9UMS5 762 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 PCDHGC4Q9Y5F7 938 aa10.69□□□□□ -0.7
CAPN3-202ENST00000337571 SMG1Q96Q15 3661 aaKnown RBP10.69□□□□□ -0.7
CAPN3-202ENST00000337571 ASXL3Q9C0F0 2248 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 TTC24A2A3L6 582 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-202ENST00000337571 GOLGA6CA6NDK9 693 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 GOLGA6BA6NDN3 693 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 ERVH48-1M5A8F1 160 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 NTN3O00634 580 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-202ENST00000337571 TRAFD1O14545 582 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-202ENST00000337571 PLD2O14939 933 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 SOCS5O75159 536 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 CPP00450 1065 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 PRB1P04280 392 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 ITGA2BP08514 1039 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 JMJD7P0C870 316 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 GOLGA6DP0CG33 693 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 PNLIPP16233 465 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 TRIM23P36406 574 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms