RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 PAOXQ6QHF9 649 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 IFNL1Q8IU54 200 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 FAM45AQ8TCE6 357 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 L3HYPDHQ96EM0 354 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 BTN2A3PQ96KV6 586 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 C8orf48Q96LL4 319 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 SH3GL3Q99963 347 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 MRPL40Q9NQ50 206 aaKnown RBP23.44■■□□□ 1.34
NDEL1-201ENST00000334527 LOC285095A0A1B0GVY8 99 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 ATP6AP2A0A1C7CYW4 349 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 ATP6AP2O75787 350 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 OAZ2O95190 189 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 SNRPB2P08579 225 aaKnown RBP23.44■■□□□ 1.34
NDEL1-201ENST00000334527 PABPC4LP0CB38 370 aaKnown RBP23.44■■□□□ 1.34
NDEL1-201ENST00000334527 SLC26A3P40879 764 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 POLD3Q15054 466 aaPredicted RBP23.44■■□□□ 1.34
NDEL1-201ENST00000334527 KCNA10Q16322 511 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 GALNT4Q8N4A0 578 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 TMEM102Q8N9M5 508 aaPredicted RBP23.44■■□□□ 1.34
NDEL1-201ENST00000334527 OR52K2Q8NGK3 314 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 EXT2Q93063 718 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 ATP6V1E2Q96A05 226 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 TADA1Q96BN2 335 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 PTERQ96BW5 349 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 FUBP3Q96I24 572 aaKnown RBP eCLIP23.44■■□□□ 1.34
NDEL1-201ENST00000334527 TBATAQ96M53 351 aa23.44■■□□□ 1.34
NDEL1-201ENST00000334527 TRPA1O75762 1119 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 HMBSP08397 361 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 RALGDSQ12967 914 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 NFE2Q16621 373 aaPredicted RBP23.43■■□□□ 1.34
NDEL1-201ENST00000334527 IL23RQ5VWK5 629 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 GLB1LQ6UWU2 654 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 CNBD2Q96M20 576 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 SARDHQ9UL12 918 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 NOD1Q9Y239 953 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 KIF3CO14782 793 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 RAMP2O60895 175 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 ADAMTS4O75173 837 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 SMIM18P0DKX4 95 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 OR1G1P47890 313 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 ISLR2Q6UXK2 745 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 CYHR1Q6ZMK1 362 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 SATL1Q86VE3 508 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 TTC9BQ8N6N2 239 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 SEMA3CQ99985 751 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 SLC25A23Q9BV35 468 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 TRMT13Q9NUP7 481 aaKnown RBP23.43■■□□□ 1.34
NDEL1-201ENST00000334527 PCDHGB4Q9UN71 923 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 PRG3Q9Y2Y8 225 aaPredicted RBP23.43■■□□□ 1.34
NDEL1-201ENST00000334527 PCDHGB5Q9Y5G0 923 aa23.43■■□□□ 1.34
NDEL1-201ENST00000334527 MRASO14807 208 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 TRIM24O15164 1050 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 INPPL1O15357 1258 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 PGM3O95394 542 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 TNK2Q07912 1038 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 IL10RBQ08334 325 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 PTPRCAPQ14761 206 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 UNC50Q53HI1 259 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 RYBPQ8N488 228 aaPredicted RBP23.42■■□□□ 1.34
NDEL1-201ENST00000334527 OR9I1Q8NGQ6 314 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 BLOC1S5Q8TDH9 187 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 RPRD1AQ96P16 312 aaPredicted RBP23.42■■□□□ 1.34
NDEL1-201ENST00000334527 ZFYVE28Q9HCC9 887 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 FBRSL1Q9HCM7 1045 aaKnown RBP23.42■■□□□ 1.34
NDEL1-201ENST00000334527 SPAG4Q9NPE6 437 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 ARL5AQ9Y689 179 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 GLP2RO95838 553 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 GOT2P00505 430 aaKnown RBP23.42■■□□□ 1.34
NDEL1-201ENST00000334527 PENKP01210 267 aaPredicted RBP23.42■■□□□ 1.34
NDEL1-201ENST00000334527 CAPNS1P04632 268 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 HERVK_113P63132 956 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 TRIM32Q13049 653 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 C6orf52Q5T4I8 152 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 ZNF549Q6P9A3 640 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 LAYNQ6UX15 382 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 LARP4Q71RC2 724 aaKnown RBP eCLIP23.42■■□□□ 1.34
NDEL1-201ENST00000334527 C19orf60Q96EN9 201 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 DNAJC1Q96KC8 554 aaKnown RBP23.42■■□□□ 1.34
NDEL1-201ENST00000334527 ERVK-6Q9BXR3 956 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.42■■□□□ 1.347e-7■■□□□ 13.7
NDEL1-201ENST00000334527 PCDHB5Q9Y5E4 795 aa23.42■■□□□ 1.34
NDEL1-201ENST00000334527 SEPT4O43236 478 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 C8BP07358 591 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 FDXRP22570 491 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 ACVRL1P37023 503 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 NFKB2Q00653 900 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 SERINC3Q13530 473 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 TRIP4Q15650 581 aaPredicted RBP23.41■■□□□ 1.34
NDEL1-201ENST00000334527 TOP1MTQ969P6 601 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 C3orf30Q96M34 536 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 AP4S1Q9Y587 144 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 PRORSD1PA6NEY8 169 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 CD3EAPO15446 510 aaKnown RBP23.41■■□□□ 1.34
NDEL1-201ENST00000334527 NRP2O60462 931 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 SOAT2O75908 522 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 CD1DP15813 335 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 HSPA13P48723 471 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 CDH13P55290 713 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 CDKL1Q00532 357 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 DSC1Q08554 894 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms