RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 UTS2BQ765I0 119 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 DEFB107AQ8IZN7 70 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 ANKRD49Q8WVL7 239 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 HTR3CQ8WXA8 447 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 NXF3Q9H4D5 531 aaKnown RBP17.21■□□□□ 0.35
PRKCD-201ENST00000330452 ATP13A2Q9NQ11 1180 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 COX16Q9P0S2 106 aa17.21■□□□□ 0.35
PRKCD-201ENST00000330452 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.2■□□□□ 0.34
PRKCD-201ENST00000330452 HDAC3O15379 428 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 ZNF26P17031 533 aaPredicted RBP17.2■□□□□ 0.34
PRKCD-201ENST00000330452 COPAP53621 1224 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 PITX1P78337 314 aaPredicted RBP17.2■□□□□ 0.34
PRKCD-201ENST00000330452 FCHO2Q0JRZ9 810 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 RAB39AQ14964 217 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 PLEKHG7Q6ZR37 379 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 CRLF3Q8IUI8 442 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 HERC6Q8IVU3 1022 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 PGLYRP2Q96PD5 576 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 OSMRQ99650 979 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 PKP2Q99959 881 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 TMEM79Q9BSE2 394 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 FAM124BQ9H5Z6 455 aaPredicted RBP17.2■□□□□ 0.34
PRKCD-201ENST00000330452 NARFLQ9H6Q4 476 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 KLK14Q9P0G3 267 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 PLXNA1Q9UIW2 1896 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 AURKAO14965 403 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 DYRK3O43781 588 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 LYPLA1O75608 230 aaPredicted RBP17.2■□□□□ 0.34
PRKCD-201ENST00000330452 BCL10O95999 233 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 GMPRP36959 345 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 NR2C2P49116 596 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 MRPS22P82650 360 aaKnown RBP17.2■□□□□ 0.34
PRKCD-201ENST00000330452 BST2Q10589 180 aaKnown RBP17.2■□□□□ 0.34
PRKCD-201ENST00000330452 ZBTB6Q15916 424 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 NRF1Q16656 503 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 C9orf57Q5W0N0 161 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 ARHGAP17Q68EM7 881 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 CATSPER4Q7RTX7 472 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 ZNF354CQ86Y25 554 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 ZDHHC17Q8IUH5 632 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 ANKRD52Q8NB46 1076 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 SLC2A14Q8TDB8 520 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 TFB1MQ8WVM0 346 aaKnown RBP17.2■□□□□ 0.34
PRKCD-201ENST00000330452 OMA1Q96E52 524 aa17.2■□□□□ 0.34
PRKCD-201ENST00000330452 SH3YL1Q96HL8 342 aaPredicted RBP17.2■□□□□ 0.34
PRKCD-201ENST00000330452 ZSWIM8A7E2V4 1837 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 MFSD11O43934 449 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 SNNO75324 88 aaPredicted RBP17.19■□□□□ 0.34
PRKCD-201ENST00000330452 MMP3P08254 477 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 RPL10AP62906 217 aaKnown RBP17.19■□□□□ 0.34
PRKCD-201ENST00000330452 POU6F2P78424 691 aaPredicted RBP17.19■□□□□ 0.34
PRKCD-201ENST00000330452 SMARCB1Q12824 385 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 CYP20A1Q6UW02 462 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 SIX6OS1Q8N1H7 587 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 COLGALT1Q8NBJ5 622 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 BEST2Q8NFU1 509 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 TTC9Q92623 222 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 RILPQ96NA2 401 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 WASH6PQ9NQA3 447 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 CACNG4Q9UBN1 327 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 PSAT1Q9Y617 370 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 USP3Q9Y6I4 520 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 TRIP12Q14669 1992 aaPredicted RBP17.19■□□□□ 0.34
PRKCD-201ENST00000330452 TK2O00142 265 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 GSRP00390 522 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 PRLP01236 227 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 CCNA2P20248 432 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 ITGAXP20702 1163 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 MGAT1P26572 445 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 MAP4P27816 1152 aaKnown RBP17.19■□□□□ 0.34
PRKCD-201ENST00000330452 TTKP33981 857 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 NUDT1P36639 197 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 SNX16P57768 344 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 DCAF4L1Q3SXM0 396 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 FASTKD1Q53R41 847 aaKnown RBP17.19■□□□□ 0.34
PRKCD-201ENST00000330452 CES3Q6UWW8 571 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 PLEKHH3Q7Z736 793 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 FAM149B1Q96BN6 582 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 ASIC4Q96FT7 647 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 C1orf74Q96LT6 269 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 GOLGA2P5Q9HBQ8 144 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRKCD-201ENST00000330452 PLXNB2O15031 1838 aa17.19■□□□□ 0.34
PRKCD-201ENST00000330452 COL1A2P08123 1366 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 A0A0A0MRY4 1105 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 ZNF487B1APH4 448 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 PLOD2O00469 737 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 SH3BP5O60239 455 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 RECQL4O94761 1208 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 ALDOAP04075 364 aaKnown RBP17.18■□□□□ 0.34
PRKCD-201ENST00000330452 PTPN1P18031 435 aaKnown RBP17.18■□□□□ 0.34
PRKCD-201ENST00000330452 SLC26A3P40879 764 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 SLC9A3P48764 834 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 POLD2P49005 469 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 SERPINB9P50453 376 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 BCAT1P54687 386 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 SLC27A1Q6PCB7 646 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 UNC93AQ86WB7 457 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 TP53INP2Q8IXH6 220 aa17.18■□□□□ 0.34
PRKCD-201ENST00000330452 DEFB106AQ8N104 65 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms