RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 NSMCE3Q96MG7 304 aa14.84□□□□□ -0.03
TSPO-201ENST00000329563 GDAP1L1Q96MZ0 367 aa14.84□□□□□ -0.03
TSPO-201ENST00000329563 RNF157Q96PX1 679 aa14.84□□□□□ -0.03
TSPO-201ENST00000329563 CWC15Q9P013 229 aaKnown RBP14.84□□□□□ -0.03
TSPO-201ENST00000329563 CLCA2Q9UQC9 943 aa14.84□□□□□ -0.03
TSPO-201ENST00000329563 MFHAS1Q9Y4C4 1052 aa14.84□□□□□ -0.03
TSPO-201ENST00000329563 HS3ST3A1Q9Y663 406 aa14.84□□□□□ -0.03
TSPO-201ENST00000329563 LRRK1Q38SD2 2015 aa14.83□□□□□ -0.03
TSPO-201ENST00000329563 hCG_1818297A0A087WSY0 165 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 LY6G6EA0A0G2JKS1 128 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 ZSCAN5CA6NGD5 496 aaPredicted RBP14.83□□□□□ -0.04
TSPO-201ENST00000329563 RIOK3O14730 519 aaKnown RBP14.83□□□□□ -0.04
TSPO-201ENST00000329563 TSPAN6O43657 245 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 PRAMEF11O60813 436 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 TIMP2P16035 220 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 IL4RP24394 825 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 PAPOLAP51003 745 aaKnown RBP14.83□□□□□ -0.04
TSPO-201ENST00000329563 SEMG2Q02383 582 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 LONRF2Q1L5Z9 754 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 ANKRD20A8PQ5CZ79 823 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 RFX8Q6ZV50 586 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 BZW1Q7L1Q6 419 aaKnown RBP14.83□□□□□ -0.04
TSPO-201ENST00000329563 PTAR1Q7Z6K3 402 aaPredicted RBP14.83□□□□□ -0.04
TSPO-201ENST00000329563 ZSWIM9Q86XI8 627 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 SLC13A5Q86YT5 568 aaPredicted RBP14.83□□□□□ -0.04
TSPO-201ENST00000329563 CREG2Q8IUH2 290 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 TTC13Q8NBP0 860 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 OR4C6Q8NH72 309 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 COG1Q8WTW3 980 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 CASKIN2Q8WXE0 1202 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 RAB7BQ96AH8 199 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 LENG8Q96PV6 779 aaPredicted RBP14.83□□□□□ -0.04
TSPO-201ENST00000329563 CSPG4P5Q96PW8 444 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 OSBPL1AQ9BXW6 950 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 USP29Q9HBJ7 922 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 HOMER3Q9NSC5 361 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 U3KQA8 63 aa14.83□□□□□ -0.04
TSPO-201ENST00000329563 HELZ2Q9BYK8 2649 aaKnown RBP14.83□□□□□ -0.04
TSPO-201ENST00000329563 SPTY2D1-AS1A0A0U1RR47 76 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 H3BM21 787 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 APOL1O14791 398 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 FFAR2O15552 330 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 MMP20O60882 483 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 NEBLO76041 1014 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 IGSF6O95976 241 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 FGGP02679 453 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 ERCC2P18074 760 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 ACTN2P35609 894 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 IGFALSP35858 605 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 DUSP3P51452 185 aaPredicted RBP14.82□□□□□ -0.04
TSPO-201ENST00000329563 NDST2P52849 883 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 PFN3P60673 137 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 DPYSQ14117 519 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 SOWAHCQ53LP3 525 aaPredicted RBP14.82□□□□□ -0.04
TSPO-201ENST00000329563 BBS12Q6ZW61 710 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 TTC7BQ86TV6 843 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 RFX6Q8HWS3 928 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 LZTR1Q8N653 840 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 MNS1Q8NEH6 495 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 ASB12Q8WXK4 309 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 UBL7Q96S82 380 aaPredicted RBP14.82□□□□□ -0.04
TSPO-201ENST00000329563 DUSP23Q9BVJ7 150 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 FRMD8P1Q9BZ68 369 aaPredicted RBP14.82□□□□□ -0.04
TSPO-201ENST00000329563 CPEB1Q9BZB8 566 aaKnown RBP14.82□□□□□ -0.04
TSPO-201ENST00000329563 MBNL1Q9NR56 388 aaKnown RBP14.82□□□□□ -0.04
TSPO-201ENST00000329563 DNAJC28Q9NX36 388 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 NCKIPSDQ9NZQ3 722 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 UBA2Q9UBT2 640 aaPredicted RBP14.82□□□□□ -0.04
TSPO-201ENST00000329563 BPTFQ12830 3046 aa14.82□□□□□ -0.04
TSPO-201ENST00000329563 COL27A1Q8IZC6 1860 aaPredicted RBP14.82□□□□□ -0.04
TSPO-201ENST00000329563 GOLGA6L10A0A0M3HER8 536 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 TSPAN11A1L157 253 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 NEMP1O14524 444 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 MUSKO15146 869 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 CD48P09326 243 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 TGM2P21980 687 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 SERPINB6P35237 376 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 EIF2S3P41091 472 aaKnown RBP14.81□□□□□ -0.04
TSPO-201ENST00000329563 NR2C2P49116 596 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 HNRNPKP61978 463 aaKnown RBP eCLIP14.81□□□□□ -0.04
TSPO-201ENST00000329563 EIF2B5Q13144 721 aaKnown RBP14.81□□□□□ -0.04
TSPO-201ENST00000329563 PDE1CQ14123 709 aaPredicted RBP14.81□□□□□ -0.04
TSPO-201ENST00000329563 KAZNQ674X7 775 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 SLC9A4Q6AI14 798 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 TMCO3Q6UWJ1 677 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 DCBLD1Q8N8Z6 715 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 TP53I13Q8NBR0 393 aaPredicted RBP14.81□□□□□ -0.04
TSPO-201ENST00000329563 TSEN2Q8NCE0 465 aaKnown RBP14.81□□□□□ -0.04
TSPO-201ENST00000329563 PCDH19Q8TAB3 1148 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 SNIP1Q8TAD8 396 aaKnown RBP14.81□□□□□ -0.04
TSPO-201ENST00000329563 FGF11Q92914 225 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 WRAP53Q9BUR4 548 aaKnown RBP14.81□□□□□ -0.04
TSPO-201ENST00000329563 TCEAL2Q9H3H9 227 aaPredicted RBP14.81□□□□□ -0.04
TSPO-201ENST00000329563 ETNK2Q9NVF9 386 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 NLGN3Q9NZ94 848 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 DKK3Q9UBP4 350 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 MRFAP1Q9Y605 127 aa14.81□□□□□ -0.04
TSPO-201ENST00000329563 ANKRD36A6QL64 1941 aa14.8□□□□□ -0.04
TSPO-201ENST00000329563 APOC4-APOC2K7ER74 178 aa14.8□□□□□ -0.04
TSPO-201ENST00000329563 FPGTO14772 594 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms