RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 FETUBQ9UGM5 382 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 SLC2A6Q9UGQ3 507 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 MRPS17Q9Y2R5 130 aaKnown RBP10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF106Q9H2Y7 1883 aaKnown RBP10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 EXOC1LA0A1B0GW35 172 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 CCDC78A2IDD5 438 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 KRBA1A5PL33 1030 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 NPIPB15A6NHN6 443 aaPredicted RBP10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 FAM159BA6NKW6 160 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 AURKAO14965 403 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 RNASEH1O60930 286 aaKnown RBP10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 ADH1BP00325 375 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 IL1BP01584 269 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 STARD6P59095 220 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 MGAT5Q09328 741 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 NAB1Q13506 487 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 PTPRRQ15256 657 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 CDKN3Q16667 212 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 UGP2Q16851 508 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 ZNF776Q68DI1 518 aaPredicted RBP10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 ESRP1Q6NXG1 681 aaKnown RBP10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 LYSMD3Q7Z3D4 306 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 MMAAQ8IVH4 418 aaKnown RBP10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 SYNPOQ8N3V7 929 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 OR13J1Q8NGT2 312 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 RPLP0P6Q8NHW5 317 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 PPCSQ9HAB8 311 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 CD248Q9HCU0 757 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 NLE1Q9NVX2 485 aaPredicted RBP10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 POLR3BQ9NW08 1133 aaPredicted RBP10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 KCTD3Q9Y597 815 aa10.27□□□□□ -0.77
VIPAS39-201ENST00000327028 ATG2BQ96BY7 2078 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 A0A1W2PQF6 199 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 CHRNB1P11230 501 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 CYP2A6P11509 494 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 LPOP22079 712 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 XPAP23025 273 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 ARNTP27540 789 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 VIPR1P32241 457 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 SUOXP51687 545 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 COPAP53621 1224 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 FAM193AP78312 1265 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 EFTUD2Q15029 972 aaKnown RBP eCLIP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 CST6Q15828 149 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 CNGA3Q16281 694 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 SKIDA1Q1XH10 827 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 POM121L1PQ3SYA9 428 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 PDPK2PQ6A1A2 396 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 KIAA1211LQ6NV74 962 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 CRTC1Q6UUV9 634 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 DPPA4Q7L190 304 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 RASSF3Q86WH2 238 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 DNAJC1Q96KC8 554 aaKnown RBP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 C19orf43Q9BQ61 176 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 HDAC8Q9BY41 377 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 GPR63Q9BZJ6 419 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 ROPN1BQ9BZX4 212 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 ROPN1Q9HAT0 212 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 LTB4R2Q9NPC1 389 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 PCDH12Q9NPG4 1184 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 DYRK4Q9NR20 520 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 B4GALT6Q9UBX8 382 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 MMP17Q9ULZ9 603 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 C1orf232A0A0U1RR37 186 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 AGPSO00116 658 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 RPP40O75818 363 aaKnown RBP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 C7P10643 843 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 COL9A1P20849 921 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 TARSP26639 723 aaKnown RBP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 HMGCLP35914 325 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 ARCN1P48444 511 aaKnown RBP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 NEK3P51956 506 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 METAP1P53582 386 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 SATB1Q01826 763 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 KBTBD12Q3ZCT8 623 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 CROCCP2Q86T23 111 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 KCNMB4Q86W47 210 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 UNC5BQ8IZJ1 945 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 OR13C4Q8NGS5 318 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 CDKL2Q92772 493 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 ZFYVE1Q9HBF4 777 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 SMYD2Q9NRG4 433 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 C20orf96Q9NUD7 363 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 VPS18Q9P253 973 aa10.26□□□□□ -0.77
VIPAS39-201ENST00000327028 KANSL1LA0AUZ9 987 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 CHURC1-FNTBB4DL54 471 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 STX7O15400 261 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 BUD23O43709 281 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 VAPBO95292 243 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 SLC4A1P02730 911 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 ZNF30P17039 623 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 C5AR1P21730 350 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 LHCGRP22888 699 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 MMP12P39900 470 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 ARSDP51689 593 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 RPS14P62263 151 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 LRRC73Q5JTD7 316 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 CEP85LQ5SZL2 805 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 LRRC66Q68CR7 880 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 ERAP2Q6P179 960 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms