RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 RAB40AQ8WXH6 277 aa2.94□□□□□ -1.94
CBX3P1-201ENST00000325243 RND1Q92730 232 aa2.94□□□□□ -1.94
CBX3P1-201ENST00000325243 C17orf77Q96MU5 243 aa2.94□□□□□ -1.94
CBX3P1-201ENST00000325243 ZNF583Q96ND8 569 aa2.94□□□□□ -1.94
CBX3P1-201ENST00000325243 CLSTN3Q9BQT9 956 aa2.94□□□□□ -1.94
CBX3P1-201ENST00000325243 LMAN2LQ9H0V9 348 aa2.94□□□□□ -1.94
CBX3P1-201ENST00000325243 C17orf75Q9HAS0 396 aa2.94□□□□□ -1.94
CBX3P1-201ENST00000325243 PLEKHA5Q9HAU0 1116 aa2.94□□□□□ -1.94
CBX3P1-201ENST00000325243 MCM9Q9NXL9 1143 aa2.94□□□□□ -1.94
CBX3P1-201ENST00000325243 KCNK7Q9Y2U2 307 aa2.94□□□□□ -1.94
CBX3P1-201ENST00000325243 PDS5AQ29RF7 1337 aaKnown RBP2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 FAM90A7PA6NKC0 464 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 KRTAP16-1A8MUX0 517 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 FAM90A22PA8MWA6 464 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 FAM90A12PA8MX19 464 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 FAM90A23PA8MXZ1 464 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 KLK8O60259 260 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 ITGA2P17301 1181 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 DRG2P55039 364 aaKnown RBP2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 ACTR2P61160 394 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 YWHAZP63104 245 aaKnown RBP2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 NEDD9Q14511 834 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 MAP9Q49MG5 647 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 STXBP5Q5T5C0 1151 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 SUSD1Q6UWL2 747 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 C17orf99Q6UX52 265 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 KRBA2Q6ZNG9 492 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 TBC1D26Q86UD7 250 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 MYLK4Q86YV6 388 aaPredicted RBP2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 CHERPQ8IWX8 916 aaKnown RBP2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 SPAG16Q8N0X2 631 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 KLHDC9Q8NEP7 349 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 PPM1EQ8WY54 764 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 RUBCNQ92622 972 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 LTV1Q96GA3 475 aaPredicted RBP2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 SMYD2Q9NRG4 433 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 RASSF1Q9NS23 344 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 TMEM30AQ9NV96 361 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 TINAGQ9UJW2 476 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 SUFUQ9UMX1 484 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 GDAQ9Y2T3 454 aa2.93□□□□□ -1.94
CBX3P1-201ENST00000325243 AKR1B15C9JRZ8 316 aaPredicted RBP2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 CEP104O60308 925 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 HMGB1P09429 215 aaKnown RBP2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 SEC61BP60468 96 aaKnown RBP2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 RUNX2Q13950 521 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 KCNT1Q5JUK3 1230 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 GTSCR1Q86UQ5 136 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 TMEM57Q8N5G2 664 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 CNBD1Q8NA66 436 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 AGBL3Q8NEM8 1001 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 OR10V1Q8NGI7 309 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 CNOT9Q92600 299 aaKnown RBP2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 TWNKQ96RR1 684 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 ATOH8Q96SQ7 321 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 PLCB1Q9NQ66 1216 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 HCFC1R1Q9NWW0 138 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 CISD1Q9NZ45 108 aaKnown RBP2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 KIF17Q9P2E2 1029 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 DNAJC16Q9Y2G8 782 aa2.92□□□□□ -1.94
CBX3P1-201ENST00000325243 GOLGA6L9A6NEM1 432 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 ANP32CO43423 234 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 PLIN1O60240 522 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 WEE2P0C1S8 567 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 SLC2A4P14672 509 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 USP8P40818 1118 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 TMPOP42166 694 aaKnown RBP2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 RAD23BP54727 409 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 CLDN2P57739 230 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 DSCR10P59022 87 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 KRT24Q2M2I5 525 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 TRNP1Q6NT89 227 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 C1orf228Q6PIY5 440 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 CEACAM20Q6UY09 585 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 ZNF852Q6ZMS4 543 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 MOB3CQ70IA8 216 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 NOTCH2NLQ7Z3S9 236 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 KMT5CQ86Y97 462 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 FOXRED2Q8IWF2 684 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 WDR63Q8IWG1 891 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 LYG1Q8N1E2 194 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 SCCPDHQ8NBX0 429 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 DUSP19Q8WTR2 217 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 POF1BQ8WVV4 589 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 CDCA5Q96FF9 252 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 ZC3HAV1LQ96H79 300 aaKnown RBP2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 KXD1Q9BQD3 176 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 HAUS8Q9BT25 410 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 LRRC1Q9BTT6 524 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 FSD1Q9BTV5 496 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 STN1Q9H668 368 aaKnown RBP2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 EPHX3Q9H6B9 360 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 CNGB3Q9NQW8 809 aa2.91□□□□□ -1.94
CBX3P1-201ENST00000325243 PABPN1LA6NDY0 278 aaKnown RBP2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 SH2D7A6NKC9 451 aaPredicted RBP2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 PER2O15055 1255 aa2.9□□□□□ -1.95
CBX3P1-201ENST00000325243 PAX1P15863 534 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms