RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 UTP15Q8TED0 518 aaKnown RBP16.66■□□□□ 0.26
PACS1-201ENST00000320580 TOP1MTQ969P6 601 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 SPATA2Q9UM82 520 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 SESN1Q9Y6P5 492 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 MAGEB16A2A368 324 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 MYCLP1P12525 358 aaPredicted RBP16.66■□□□□ 0.26
PACS1-201ENST00000320580 EFNA5P52803 228 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 SGO1Q5FBB7 561 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 RAP1GAP2Q684P5 730 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 CADM3Q8N126 398 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 FNDC5Q8NAU1 212 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 SKA2Q8WVK7 121 aaPredicted RBP16.66■□□□□ 0.26
PACS1-201ENST00000320580 SH3YL1Q96HL8 342 aaPredicted RBP16.66■□□□□ 0.26
PACS1-201ENST00000320580 CPXM1Q96SM3 734 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 RHOBTB2Q9BYZ6 727 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 SKIV2LQ15477 1246 aaKnown RBP16.66■□□□□ 0.26
PACS1-201ENST00000320580 SYT16Q17RD7 645 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 TRIM69Q86WT6 500 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 UBE2J2Q8N2K1 259 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 TRPV3Q8NET8 790 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 ACDQ96AP0 544 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 HPDLQ96IR7 371 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 AGAP2Q99490 1192 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 TUBA1CQ9BQE3 449 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 FUNDC2Q9BWH2 189 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 ALG2Q9H553 416 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 A0A087WZ62 844 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 EFCAB9A8MZ26 197 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 GTF2E2P29084 291 aaKnown RBP16.66■□□□□ 0.26
PACS1-201ENST00000320580 MEP1AQ16819 746 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 KLHL12Q53G59 568 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 LINC00523Q86TU6 105 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 WDR49Q8IV35 697 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 TTYH2Q9BSA4 534 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 ALG9Q9H6U8 611 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 PSAT1Q9Y617 370 aa16.66■□□□□ 0.26
PACS1-201ENST00000320580 OGTO15294 1046 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 YES1P07947 543 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 ENDOUP21128 410 aaKnown RBP16.65■□□□□ 0.26
PACS1-201ENST00000320580 PPP1R8Q12972 351 aaKnown RBP16.65■□□□□ 0.26
PACS1-201ENST00000320580 GRM3Q14832 879 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 SYCE2Q6PIF2 218 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 SCIMPQ6UWF3 145 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 ITIH5Q86UX2 942 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 DHRS4Q9BTZ2 278 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 TMEM245Q9H330 911 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 AGO4Q9HCK5 861 aaKnown RBP16.65■□□□□ 0.26
PACS1-201ENST00000320580 TSPAN16Q9UKR8 245 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 CROCCQ5TZA2 2017 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 PRSS51A0A1B0GVH4 220 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 NUAK1O60285 661 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 SNHG28P0DPA3 235 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 MYF6P23409 242 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 EPHX2P34913 555 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 SLC9A3P48764 834 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 NPY2RP49146 381 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 HSD17B4P51659 736 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 CD83Q01151 205 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 CCBE1Q6UXH8 406 aaPredicted RBP16.65■□□□□ 0.26
PACS1-201ENST00000320580 UBE2Q1Q7Z7E8 422 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 ACOT1Q86TX2 421 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 DEPDC4Q8N2C3 294 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 FSTL5Q8N475 847 aaPredicted RBP16.65■□□□□ 0.26
PACS1-201ENST00000320580 ACER1Q8TDN7 264 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 FAM120BQ96EK7 910 aaKnown RBP16.65■□□□□ 0.26
PACS1-201ENST00000320580 ACAT2Q9BWD1 397 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 APOBEC3GQ9HC16 384 aaKnown RBP16.65■□□□□ 0.26
PACS1-201ENST00000320580 CCDC59Q9P031 241 aaKnown RBP16.65■□□□□ 0.26
PACS1-201ENST00000320580 RGS10O43665 173 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 TMCC2O75069 709 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 C5P01031 1676 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 ALDOAP04075 364 aaKnown RBP16.65■□□□□ 0.26
PACS1-201ENST00000320580 CDH17Q12864 832 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 TTC23LQ6PF05 361 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 ANKRD12Q6UB98 2062 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 ARMCX2Q7L311 632 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 LYSMD3Q7Z3D4 306 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 DSG4Q86SJ6 1040 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 DCSTAMPQ9H295 470 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 CRNNQ9UBG3 495 aaPredicted RBP16.65■□□□□ 0.26
PACS1-201ENST00000320580 ATP6V1HQ9UI12 483 aa16.65■□□□□ 0.26
PACS1-201ENST00000320580 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.26
PACS1-201ENST00000320580 BCKDKO14874 412 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 PSMD3O43242 534 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 GPD2P43304 727 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 RHBDL3P58872 404 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 RAB10P61026 200 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 PLD6Q8N2A8 252 aaKnown RBP16.64■□□□□ 0.25
PACS1-201ENST00000320580 ZFP90Q8TF47 636 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 MFSD3Q96ES6 412 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 MRPL57Q9BQC6 102 aaKnown RBP16.64■□□□□ 0.25
PACS1-201ENST00000320580 LHPPQ9H008 270 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 CHRAC1Q9NRG0 131 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 COQ3Q9NZJ6 369 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 WRAP73Q9P2S5 460 aaPredicted RBP16.64■□□□□ 0.25
PACS1-201ENST00000320580 TNFRSF10AO00220 468 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 DAG1Q14118 895 aa16.64■□□□□ 0.25
PACS1-201ENST00000320580 RBM48Q5RL73 367 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms