RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 OSBPL6Q9BZF3 934 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 SUDS3Q9H7L9 328 aaPredicted RBP15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 NINJ2Q9NZG7 142 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 SLC17A6Q9P2U8 582 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 PHTF1Q9UMS5 762 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 INVSQ9Y283 1065 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 NUMA1Q14980 2115 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 OR51F1A6NGY5 319 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 CAPN8A6NHC0 703 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 ALOX15BO15296 676 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 PPFIA2O75334 1257 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 ERLIN1O75477 346 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 NEK3P51956 506 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 POLR2LP62875 67 aaKnown RBP15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 MSLNQ13421 630 aaPredicted RBP15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 SLC14A2Q15849 920 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 FAM46CQ5VWP2 391 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 ALS2CLQ60I27 953 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 ESRP1Q6NXG1 681 aaKnown RBP15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 TSSK4Q6SA08 328 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 CRTC1Q6UUV9 634 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 SYT13Q7L8C5 426 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 OR4K2Q8NGD2 314 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 OR14C36Q8NHC7 312 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 DNAJC1Q96KC8 554 aaKnown RBP15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 FCRL3Q96P31 734 aaPredicted RBP15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 NELL2Q99435 816 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 EBNA1BP2Q99848 306 aaKnown RBP15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 ZFYVE1Q9HBF4 777 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 ARNT2Q9HBZ2 717 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 LRRC4CQ9HCJ2 640 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 POLMQ9NP87 494 aaPredicted RBP15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 TCAF1Q9Y4C2 921 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 CCDC151A5D8V7 595 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 E7ESA3 106 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 LDB2O43679 373 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 ALADP13716 330 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 EFTUD2Q15029 972 aaKnown RBP eCLIP15.43■□□□□ 0.065e-8■□□□□ 11.1
PDLIM5-202ENST00000318007 E2F5Q15329 346 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 CNGA3Q16281 694 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 MAP9Q49MG5 647 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 PCID2Q5JVF3 399 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 PIP5KL1Q5T9C9 394 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 AGBL4Q5VU57 503 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 TRMT10BQ6PF06 316 aaKnown RBP15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 UNC5AQ6ZN44 842 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 C3orf62Q6ZUJ4 267 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 FAM160A2Q8N612 972 aaPredicted RBP15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 OR2W6PQ8NHA6 318 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 KLK6Q92876 244 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 PBXIP1Q96AQ6 731 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 SCRN2Q96FV2 425 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 PLAC1Q9HBJ0 212 aa15.43■□□□□ 0.06
PDLIM5-202ENST00000318007 SPINT1O43278 529 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 PCDH8O95206 1070 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 ADH1BP00325 375 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 C5AR1P21730 350 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 NPY2RP49146 381 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 GPX6P59796 221 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 ARHGEF7Q14155 803 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 CRYMQ14894 314 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 BRD3Q15059 726 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 ERAP2Q6P179 960 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 EMBQ6PCB8 327 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 BRSK1Q8TDC3 778 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 FRMD8Q9BZ67 464 aaPredicted RBP15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 ABCG8Q9H221 673 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 ARGLU1Q9NWB6 273 aaPredicted RBP15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 CYP8B1Q9UNU6 501 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 ZDBF2Q9HCK1 2354 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 HEATR9A2RTY3 570 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 MMP20O60882 483 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 ELFN1P0C7U0 828 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 PRSS56P0CW18 603 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 PGAM1P18669 254 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 MAT2AP31153 395 aaKnown RBP15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 ARSDP51689 593 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 DGKEP52429 567 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 SLC29A2Q14542 456 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 SLMAPQ14BN4 828 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 UAP1Q16222 522 aaPredicted RBP15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 NDUFAF2Q8N183 169 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 SYNPOQ8N3V7 929 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 FAM129AQ9BZQ8 928 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 CHRDQ9H2X0 955 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 PABPC3Q9H361 631 aaKnown RBP15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 SOX13Q9UN79 622 aa15.42■□□□□ 0.06
PDLIM5-202ENST00000318007 TMEM221A6NGB7 291 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 SMIM23A6NLE4 172 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 C2orf81A6NN90 581 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 M0R296 226 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 RIPK2O43353 540 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 ATG13O75143 517 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 VAPBO95292 243 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 CRTAMO95727 393 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 POLBP06746 335 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 ERVK-10P10266 1014 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 H2AFXP16104 143 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 ADRA1DP25100 572 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 ACSL1P33121 698 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms