RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 CFAP58Q5T655 872 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 ESRP1Q6NXG1 681 aaKnown RBP15.61■□□□□ 0.09
FOXR1-201ENST00000317011 PNCKQ6P2M8 343 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 ALKBH5Q6P6C2 394 aaKnown RBP15.61■□□□□ 0.09
FOXR1-201ENST00000317011 TMCO3Q6UWJ1 677 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 LRRC69Q6ZNQ3 347 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 HID1Q8IV36 788 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 PELI3Q8N2H9 469 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 ARL10Q8N8L6 244 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 GPR156Q8NFN8 814 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 ATL2Q8NHH9 583 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 BTBD6Q96KE9 485 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 WDR92Q96MX6 357 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 SLC46A1Q96NT5 459 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.61■□□□□ 0.09
FOXR1-201ENST00000317011 NOD2Q9HC29 1040 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 RCOR3Q9P2K3 495 aaPredicted RBP15.61■□□□□ 0.09
FOXR1-201ENST00000317011 PCDHGC4Q9Y5F7 938 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 PCDHGA8Q9Y5G5 932 aa15.61■□□□□ 0.09
FOXR1-201ENST00000317011 TNFP01375 233 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 GYPCP04921 128 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 PDX1P52945 283 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 TLE3Q04726 772 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 RBM44Q6ZP01 1051 aaKnown RBP15.6■□□□□ 0.09
FOXR1-201ENST00000317011 GKN2Q86XP6 184 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 OR56A4Q8NGH8 313 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 CPLX3Q8WVH0 158 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 SCG3Q8WXD2 468 aaKnown RBP15.6■□□□□ 0.09
FOXR1-201ENST00000317011 OR1E3Q8WZA6 343 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 HSPH1Q92598 858 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 SCRN2Q96FV2 425 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 NUP85Q9BW27 656 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 LGR4Q9BXB1 951 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.6■□□□□ 0.09
FOXR1-201ENST00000317011 KCTD5Q9NXV2 234 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 B4GALT6Q9UBX8 382 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 KLQ9UEF7 1012 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 PHTF1Q9UMS5 762 aa15.6■□□□□ 0.09
FOXR1-201ENST00000317011 LUC7L2Q9Y383 392 aaKnown RBP15.6■□□□□ 0.09
FOXR1-201ENST00000317011 COL27A1Q8IZC6 1860 aaPredicted RBP15.6■□□□□ 0.09
FOXR1-201ENST00000317011 BPTFQ12830 3046 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 MYO1FO00160 1098 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 FZD6O60353 706 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 PCCBP05166 539 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 ELFN1P0C7U0 828 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 CTSEP14091 401 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 TEAD1P28347 426 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 CDC25BP30305 580 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 CDH6P55285 790 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 GABREP78334 506 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 COL9A2Q14055 689 aaPredicted RBP15.59■□□□□ 0.09
FOXR1-201ENST00000317011 ASTE1Q2TB18 679 aaPredicted RBP15.59■□□□□ 0.09
FOXR1-201ENST00000317011 TDRD12Q587J7 1177 aaKnown RBP15.59■□□□□ 0.09
FOXR1-201ENST00000317011 SPACA3Q8IXA5 215 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 SPC24Q8NBT2 197 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 ZNF248Q8NDW4 579 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 OR6C4Q8NGE1 309 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 PIH1D2Q8WWB5 315 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 FATE1Q969F0 183 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 ATXN7L3BQ96GX2 97 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 MCCC1Q96RQ3 725 aaPredicted RBP15.59■□□□□ 0.09
FOXR1-201ENST00000317011 CCDC3Q9BQI4 270 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 TEX101Q9BY14 249 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 FGF22Q9HCT0 170 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 RABGEF1Q9UJ41 708 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 ANAPC7Q9UJX3 599 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.59■□□□□ 0.09
FOXR1-201ENST00000317011 LRRK1Q38SD2 2015 aa15.59■□□□□ 0.09
FOXR1-201ENST00000317011 CDRT15L2A8MXV6 281 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 CACNB4O00305 520 aaPredicted RBP15.58■□□□□ 0.08
FOXR1-201ENST00000317011 HEXIM1O94992 359 aaKnown RBP15.58■□□□□ 0.08
FOXR1-201ENST00000317011 PGLSO95336 258 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 FUCA1P04066 466 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 CD48P09326 243 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 PNLIPP16233 465 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 VIPR1P32241 457 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 SERPINB6P35237 376 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 TRAF2Q12933 501 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 IHHQ14623 411 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 PAFAH1B3Q15102 231 aaKnown RBP15.58■□□□□ 0.08
FOXR1-201ENST00000317011 CNGA3Q16281 694 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 ATP13A4Q4VNC1 1196 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 CCDC122Q5T0U0 273 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 MARC1Q5VT66 337 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 ALG1LQ6GMV1 187 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 RD3Q7Z3Z2 195 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 TECPR1Q7Z6L1 1165 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 NLRP8Q86W28 1048 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 C17orf82Q86X59 251 aaPredicted RBP15.58■□□□□ 0.08
FOXR1-201ENST00000317011 LSM14AQ8ND56 463 aaKnown RBP15.58■□□□□ 0.08
FOXR1-201ENST00000317011 PCDH19Q8TAB3 1148 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 MAML1Q92585 1016 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 ANP32BQ92688 251 aaKnown RBP15.58■□□□□ 0.08
FOXR1-201ENST00000317011 PDXPQ96GD0 296 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 TSGA13Q96PP4 275 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 GULP1Q9UBP9 304 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 APPL1Q9UKG1 709 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 GPR34Q9UPC5 381 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 SATB2Q9UPW6 733 aa15.58■□□□□ 0.08
FOXR1-201ENST00000317011 A0A1W2PQM1 296 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms